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Detailed information on CNT30203149


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526253Helianthus annuusPhaseolus vulgaris43.3243.7583.46133forward
CNT30612441Helianthus annuusArabis alpina47.8847.7382.99147reverse complement
CNT30625980Helianthus annuusDaucus carota27.6927.8784.7185forward
CNT30572468Helianthus annuusVitis vinifera35.519.7582.57109forward

Expression of CNT30203149

Peptides detected in this lncRNA

>peptide 1 (57 aa)
LGLVALACNSSEGIKDGWTVIQPSQVGSIGAQTGLPVPSCELDHVAQAKAWVTLFLK*

Sequence

>CNT30203149
ACTGGGCTTGGTAGCGCTTGCCTGTAACTCAAGTGAGGGTATTAAAGATGGCTGGACAGTGATTCAGCCCAGTCAGGTTGGCTCCATTGGTGCACAAACT
GGCTTGCCCGTTCCAAGTTGTGAGTTGGACCATGTGGCTCAAGCGAAGGCTTGGGTTACGTTGTTCCTAAAGTAGGGGGCACTGCGTAAGGCTGGTTTCA
CAGAGCTGCGAAAACTCCTCGCTCGTGACAGTGGAAGGATAACAAGTCGGGGCTCCTTGGGTCCATAATAATCTGCTCGGCTGTCTCAAATGAACATCCA
TCTTTTT