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Detailed information on CNT30572468


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30203149Vitis viniferaHelianthus annuus19.7535.582.57109forward
CNT3026410Vitis viniferaPopulus trichocarpa11.0520.0793.4461forward
CNT3051085Vitis viniferaCucumis sativus13.0423.7686.1172forward

Expression of CNT30572468

Peptides detected in this lncRNA

>peptide 1 (40 aa)
LVTWACDSSEGMKVVEGWFGWRGRVRWVLRFWLARSKWGV*

Sequence

>CNT30572468
CCTGGTAACGTGGGCTTGTGACTCAAGTGAGGGCATGAAGGTGGTTGAAGGTTGGTTTGGCTGGAGAGGTAGGGTTCGCTGGGTTTTGAGATTCTGGCTT
GCCCGTTCCAAGTGGGGAGTTTGAACCTTGTGTCCCAACCGAAGGGTTGGGGAACGTGGTTCCTAGAGTGGAGGGCACCGCGTGAGGCTGGGCTCACAGA
GCAGCGTTCACCTCCCGCTCCCCTCGGTGGAAGGACAACGAGCCGGTACTCCACGGGCCCAACGATACCTCCTCAGCCGCTCTCAACCCGACAACCACTT
TTTACCTCTTTTGTTTTTCTTCATTCCAGCCAGTGGGTCATGGGTAAATGGGGGCCAAAATCAGTGACTGGGTTTAGTTTCTGAAAATAGTTGGTGAGCC
ATTTGATTTGCACCCAGAATATCCTATAGATTTTTTGGATATATTCATCAATGTCATGACACCTTCTTCAGATTAAAATTGCATGTAAATTTACCAGTCC
ATTCGACTTCTGTGGGGCATGCAAATGCCCTGTTAATTCCATGGAACTCTTC