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Detailed information on CNT30199996


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 3e-90

BLAST vs NONCODE:
NONTPRT001389, E-value = 2e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628953Pisum sativumVigna unguiculata70.455.0586.55409forward
CNT30710825Pisum sativumGlycine max52.8461.6586.32307forward
CNT30145430Pisum sativumMedicago truncatula64.221.2488.47373forward

Expression of CNT30199996

Peptides detected in this lncRNA

>peptide 1 (54 aa)
EKIKDLIHRNCFEHTPILNTIDTEGTQKRKQTYYRTTQMQTNILQGQHKRKQIY*

Sequence

>CNT30199996
TGAGAAAATAAAAGACTTGATACATCGGAATTGTTTCGAACATACGCCAATTTTAAACACAATAGATACAGAAGGGACACAGAAGCGCAAACAAACATAC
TACAGGACAACACAAATGCAAACAAACATACTACAGGGACAACACAAACGCAAACAAATATACTAGGACACACTTAGAATCCACCACGGAGACGGAGAAC
AAGGTGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAGGTACGACCATCCTCCAACTGCTTGCCTGCAAAAATAAGCCTCTGCTGGTCAGGTGGA
ATACCCTCCTTATCCTGTATTTTTGTTTTCACATTATCAATAGTGTCAGAGCTTTCCACCTCCAAGGTAATAGTCTTCCCAGTAAGTGTCTTCACAAATA
TTTGCATCCCACCACGAAGCCTCAAAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCCAATTGTTTCCCTGC
AAAGATAAGCCTTTGCTGATCAGGTGGAATCCCTTCCTTATCTTGAATCTTAGCTTTCACGTTGTCTATGGTATCAGAACT