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Detailed information on CNT30628953


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 8e-127

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-85

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525249Vigna unguiculataPhaseolus vulgaris74.9737.3895.51557forward
CNT30199996Vigna unguiculataPisum sativum55.0570.486.55409forward

Expression of CNT30628953

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MKSGFLLDVIISKCTPIFQLLPSKDKPLLVWWNTLFVLYLCLYIVNGIRTFNLQSNSFPGQSLHKDLHATPQTKHQVERGLLLNVVISKGSSVLKLFTS

>peptide 2 (37 aa)
MVSELSTSKVIVFPVKVFTKICMPPLKRSTKWSVDSF*

Sequence

>CNT30628953
CTATTTTGTAATAGTTATATAGTTAACAAACAATAGCGATGATACTAGTCTTTCAATCTTTTGTTGAATTACAAACATATACTAGTCTTCGAACATAAGA
AAAGCACCCAACCGAGAACTGCAGCACACGATTTCAATTGACACTGGACACAATAGATAGCTGGACATAATAGACACGAAGCTTAGCTTAGAAACCACCG
CGAAGGCGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGCTTCCCGGCAAAGATAAGCCTCT
GTTGATCAGGTGGGATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAG
AGTCTTCACAAATATTTGCATACCCCCACGAAGCCTTAACACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCAGCAAGTGTACGCCCATCTTCC
AGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGAATACCCTCTTTGTCCTGTATCTTTGCCTTTACATTGTCAATGGTATCAGAACTTTCAA
CCTCCAAAGTAATAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGAATGTT
GTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGTTTACCAGCG