« Back to Glycine max search


Detailed information on CNT30710825


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-67

BLAST vs NONCODE:
NONMTRT001024, E-value = 2e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30199996Glycine maxPisum sativum61.6552.8486.32307forward

Expression of CNT30710825

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVMVFPVKVLTKICMPPRSRNTKCRVDSFWML*

>peptide 2 (94 aa)
MQGGFLLNIVICQGTTIFQLLPSKNKPLLIRWNALLVLNLCLHIINGIRTFNLQSYGFSSQSLNKDLHATTKPQHQVQGRFLLDVIVSKGSSIFK

Sequence

>CNT30710825
GTGAGATGATAATGGTTTTTTATTCTTTTGCACGAGACCGTGCATAGCAAGCTATGTCACAGACATAGCCTTAAAACTAAAAACATTAAAGCAGCACCTA
AATAACAGCTGCAACCAACGAGTTCAACATACACTGGACATAACAACAGAGAATTCAACTAATATTGGACATAACAGACAGACTCAGAAACCACCACGAA
GGCGGAGGACAAGATGCAGGGTGGATTCCTTCTGAATATTGTAATCTGCCAAGGTACGACCATCTTCCAGTTGCTTCCCAGCAAAAATAAGCCTCTGCTG
ATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATGGTATCAGAACTTTCAACCTCCAAAGTTATGGTTTTTCCAGTCAAAGTC
TTAACAAAGATTTGCATGCCACCACGAAGCCGCAACACCAAGTGCAGGGTAGATTCCTTCTGGATGTTATAGTCAGCAAGGGTTCTTCCATCTTCAAG