Detailed information on CNT30174619


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3047375Vigna angularisPrunus dulcis4.3535.2897.25109forward
CNT30414626Vigna angularisPapaver somniferum8.0645.9193.56202forward
CNT3022114Vigna angularisPopulus trichocarpa7.2228.7388.95181forward

Expression of CNT30174619

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRSTSQFLAPHTKEEKEGSSHGWVDEDSK*

>peptide 2 (39 aa)
MAGWTKTASSSRIQQPSRCSCYGVFTVWFGSIPAATLRE*

>peptide 3 (32 aa)
MVCTAGRNSPCSSGLFGAATVQHFFTSSSCTS*

>peptide 4 (79 aa)
MQSVGASSEAHGCHMKKLQPLSRHEEEAAGPAEAAVHGWLEERSKVLHGDGGAAGSEKQEKNWRKHGRCNTARSSRFDA*

>peptide 5 (48 aa)
IPKRVMKGITNIPCLHIGSRTGSEGSKTANSYRAIEPAQPATRAVCII*

>peptide 6 (85 aa)
MKKKQLVQQRQQFTAGWKKEARCCMVMEVQLVQKSKRRIGGSMGGATQHGPADLMHDDRMKCCIPVSGALSRKPEWAAAACWRRN*

>peptide 7 (48 aa)
MLLKIKGRKRLKLKGSKEVELFLKVQQGALGFIQISASMFCLKFFLFN*

>peptide 8 (42 aa)
MLHSREWSFVQKARVGSSSMLEKKLTEEEEPTALIGEFIGFA*

Sequence

>CNT30174619
ATTCCTAAACGAGTCATGAAAGGTATAACGAACATACCCTGTCTCCACATTGGATCAAGAACAGGGTCAGAGGGATCAAAAACTGCTAATTCATATAGAG
CCATCGAACCGGCCCAACCAGCAACTAGAGCTGTGTGCATTATATGAACAGAAAGCAAACGGCCCGGATCATTTAAAACAACAGTATGAACACGATACCA
AGAAGTATAAGATAAGGAGGCACGGGAGTTTTAATCTGCAGGAATTAGAGTGCCTAGAACCACTTGGTCGAGAGAGTGTTTTTGAGAACAGGTGAACAAG
TTGCTGGAAATTTTCAAGGTTATAGGAGAATTCTGGTGGTGCAAAGAAAAGAAATTGAGAGGAACCCAAGATATGAAATAAATTGGGCTTCTATGCTGAC
TGGACTGGCACTGGGTTGCTGAAATTGGGTGCTACAAGTGGAAATTTGAACGTTGCTGCTGCATTGGAGAATTGGGCCACTTGAGCTGCCACTGCATTAG
GCTGAAAGTGAATTGGGCTGCATGGGCTGATTTCAATTAATTGGAACGGCGCCGTTTTGGAGGCTGGCAGCTGCAGTTCCCTTGGGGGTCTTCGCGTGCG
TAATTCATTTGGGGAAAGAATTCAATGTGCTTGCATTTGGAGAGAAGAAACACTTAAGCTAGGGCTTGTGCGAGAGAAGCAAGGGAGAAGAAAAGCTCTC
GCCACTTACCCAAAGAAGAACCTGACCGGTGGAGCTGAAGACATGACCGGAGCGCGATCCTCGCCAGAGAAGAAGCTGACCGAAGCTTAAGTGGATCGGA
GGGTTTAGAGCGCACAGCTTTTGGAGACCGTTGGATCAAGGTGAAGCTCGAAGCGTCACAACAAGTTTCATTTGAGGAGAATGGTGTGCACGGCTGGAAG
AAACTCTCCATGTTCCAGCGGCCTTTTTGGAGCAGCCACGGTGCAGCACTTCTTCACATCCAGCAGCTGCACATCTTGAGATGAGAAGCACCTCACAGTT
CTTGGCTCCACACACCAAGGAAGAGAAAGAAGGAAGCTCTCATGGCTGGGTGGACGAAGACAGCAAGTAGCTCACGCATCCAGCAGCCTTCACGTTGCAG
CTGCTATGGAGTTTTTACAGTCTGGTTTGGCAGCATTCCAGCAGCCACCTTGAGAGAATAAAAGGGAGTGTAGCTCACGGTTTTGTCTGTGAATGGGCAG
CAGCTCACGGCTGGAAGGCCAGCACAAGGGTGACAACCAGCAGTAGCAACACGCATGCAAAGTGTTGGAGCATCCAGTGAAGCACACGGCTGCCACATGA
AGAAGCTGCAGCCACTGTCACGGCATGAAGAAGAAGCAGCTGGTCCAGCAGAGGCAGCAGTTCACGGCTGGCTGGAAGAAAGAAGCAAGGTGCTGCATGG
TGATGGAGGTGCAGCTGGTTCAGAAAAGCAAGAGAAGAATTGGAGGAAGCATGGGAGGTGCAACACAGCACGGTCCAGCAGATTTGATGCATGATGACAG
AATGAAATGCTGCATTCCCGTGAGTGGAGCTTTGTCCAGAAAGCCAGAGTGGGCAGCAGCAGCATGTTGGAGAAGAAACTGACGGAAGAGGAGGAGCCCA
CGGCACTCATAGGAGAGTTCATTGGTTTTGCTTAAGTTGCTTGCACCAGCCGGCAGTGGATTATTTTATTTGGAAGAATGGAGAGCAATTGATTGTCTTT
TTGTCTTCTTTTGACATAAATTGAAGGTGCATTCGGAAGTGGAGGGCACATATTCATTTTCCCTTATCTTTTTAAGAAAAGTGGAGGGCCCCTTTTAGTC
TCATTGTATGTACCGTCTGAAGGAAGTTGGATTTAAAAAGGAGGCAAAATAAAAGGAGAAGGAGCCGTGTAGAGACCGAGAAGAGAGGAGGATGCCGTGA
GCTTGGATGGTAGGCAGAGAGAAAATTCTGAGTTATGTGTGGAGGCCGTGAGGCAGAGAGGGGGACGGTAGACCAGGAGGATGATGTTGCTTGAAGGATG
GTACACAAAGACGCTGCAAAGGAGAGCTCTTCAGTGATTTTATTCTTTTAATGTTGTTTAGAGAACTTTGTAATTTCATCTTGGAAGTGTTTGTTTTTCT
TCTTTTAATTTGTGCTTGATTGTTCACGGCTGTTCTAAGGAGAAGAATGAAGTATTGTTTTATGATTTTATTTTAATGTTGTTAAAAATCAAAGGAAGGA
AAAGATTAAAATTGAAAGGAAGTAAAGAGGTTGAATTGTTTTTGAAGGTGCAGCAAGGAGCTCTCGGGTTCATTCAAATTTCAGCATCAATGTTTTGTTT
GAAATTCTTCTTGTTCAATTAGATGAATATTAATTGTAGAGAGGAGTAGGTGTGTACCGTCCCAAGAGTTTCTTTTCCTTATAGAAATCATCATTTTCTT
CTAAAAAATCCATTAGCATTTAGTCCCAACATGTGGGACCTTTTCTTACATTTGATTTTGTCTCTTTTTAGTTTTGAAGAATGAAAACCGTAGCTAGAAT
GGTGTGG