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Detailed information on CNT30414626


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAL2|PSBB_PHAAO, E-value = 1e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200101Papaver somniferumPisum sativum96.3627.4391.51424forward
CNT30491922Papaver somniferumOlea europaea4060.6988.64176forward
CNT3047375Papaver somniferumPrunus dulcis57.2781.5593.65252forward
CNT3090302Papaver somniferumSolanum tuberosum33.4123.2292.52147forward
CNT30283847Papaver somniferumTriticum aestivum95.9130.8988.86422forward
CNT3068316Papaver somniferumLeersia perrieri42.2732.1288.71186forward
CNT3054326Papaver somniferumAmborella trichopoda37.2711.2189.63164reverse complement
CNT30110673Papaver somniferumOryza longistaminata33.4154.2491.16147forward
CNT3021701Papaver somniferumPopulus trichocarpa56.5918.9889.16249forward
CNT3039143Papaver somniferumCucumis melo91.1436.0694.26401forward
CNT30174619Papaver somniferumVigna angularis45.918.0693.56202forward

Expression of CNT30414626

Peptides detected in this lncRNA

>peptide 1 (49 aa)
PIYPMPDSCQEAQARKQNMCPGHTFVTPNTRIRYSPSCDTPTTPGIRYS*

>peptide 2 (57 aa)
MKGITNIPCLHIGSRTGSEGSKTANSYRAIEPAQPETRAVCIIWTESNRPGSFNTTV*

>peptide 3 (28 aa)
MEIPLYQRKIDTMLLYRIGKDSAYAMDFS

>peptide 4 (36 aa)
MNTIPRQTHGNTPLSKKNRYYVTLSHWKRLCLCYGLL

Sequence

>CNT30414626
CCCAATATACCCAATGCCAGATAGCTGCCAAGAAGCACAAGCCAGAAAACAGAATATGTGCCCCGGCCACACCTTCGTAACTCCAAATACCCGGATTCGT
TATAGTCCCTCCTGTGATACTCCAACCACCCCAGGAATTCGTTATTCCTAAACGAGTCATGAAAGGTATAACGAACATACCTTGTCTCCACATTGGATCA
AGAACTGGGTCAGAGGGATCAAAAACGGCTAATTCGTATAGAGCCATCGAACCGGCCCAACCAGAAACTAGAGCTGTATGCATTATATGGACAGAAAGTA
ACCGGCCGGGATCATTCAATACAACGGTATGAACACGATACCAAGGCAAACCCATGGAAATACCCCTTTATCAAAGAAAAATAGATACTATGTTACTTTA
TCGCATTGGAAAAGACTCTGCTTATGCTATGGACTTCTCC