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Detailed information on CNT30150515


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675842Brachypodium distachyonSetaria viridis21.7817.7497.7344forward
CNT30228593Brachypodium distachyonAnanas comosus38.1228.8484.4277forward
CNT30573009Brachypodium distachyonVitis vinifera42.5733.0884.8886forward

Expression of CNT30150515

Peptides detected in this lncRNA

>peptide 1 (65 aa)
VLAQLAEPVIRPWAGHRFVPELVEEAHGPHGTRLLPCTYAETYACRRRRLRRCLMGEPERGEWKGR

>peptide 2 (40 aa)
STCAACRARDPALGRPPFRPRAGRGGPWPARYAAAPVYVR*

Sequence

>CNT30150515
GAGTACTTGCGCAGCTTGCCGAGCCCGTGATCCGGCCTTGGGCCGGCCACCGTTTCGTCCCAGAGCTGGTCGAGGAGGCCCATGGCCCGCACGGTACGCG
GCTGCTCCCGTGTACGTACGCTGAGACGTATGCGTGTCGTCGCCGCCGTCTTCGTCGTTGTTTGATGGGGGAACCGGAGAGAGGTGAATGGAAGGGAAGG
GA