Detailed information on CNT30675842


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30228593Setaria viridisAnanas comosus2523.2288.7162forward
CNT30150515Setaria viridisBrachypodium distachyon17.7421.7897.7344forward

Expression of CNT30675842

Peptides detected in this lncRNA

>peptide 1 (55 aa)
TRWGSSARRPDSGRGPATVSSQSWSRRPIPTRTVRDWLALRKWLDVCARFLLARR*

>peptide 2 (51 aa)
HGGAPPPDGRTPGAGRPPSRPRAGRGGPFPPEPYAIGWPCVSGWTYARVFS*

>peptide 3 (40 aa)
TVGLLRPTAGLRARAGHRLVPELVEEAHSHQNRTRLAGPA*

Sequence

>CNT30675842
ACACGGTGGGGCTCCTCCGCCCGACGGCCGGACTCCGGGCGCGGGCCGGCCACCGTCTCGTCCCAGAGCTGGTCGAGGAGGCCCATTCCCACCAGAACCG
TACGCGATTGGCTGGCCCTGCGTAAGTGGTTGGACGTATGCGCGCGTTTTCTCCTAGCTCGCCGATGAGAGAGATGAGGAGGGGGTGCCGTGCCTTGAGC
AGTTGAGCCTGGTGGCGGATGACGATTCCTCTGTACACGCCCCCATGT