Detailed information on CNT30145466


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBR3|PSAJ_LOTJA, E-value = 2e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090025Medicago truncatulaSolanum tuberosum37.335.5188.06134reverse complement
CNT30202570Medicago truncatulaHelianthus annuus37.3317.9185.07134reverse complement
CNT30627902Medicago truncatulaDaucus carota33.713.5786.78121forward
CNT30152830Medicago truncatulaPrunus persica27.021.3883.5197reverse complement

Expression of CNT30145466

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MRDLKTYLSVAPVASTLWFAVLAGLLIEINRLFPDALTFPFF*

>peptide 2 (35 aa)
MVRGSSRSLDRNQSFIPGCIDIPLFLILVIGTGKG*

Sequence

>CNT30145466
ATTACAAATTATATGAAAAAAAAACAAAGGAGGATTTGAAATGCGAGATCTAAAAACATATCTCTCTGTGGCACCTGTGGCAAGTACTCTATGGTTCGCG
GTTCTAGCAGGTCTCTTGATAGAAATCAATCGTTTATTCCCGGATGCATTGACATTCCCCTTTTTTTGATTCTAGTTATTGGCACGGGAAAGGGGTGACA
AAGATTAGAGATCCAATAAAATATCTGTGAATAAATCCCTCTTCGTTCGTTTTTTTTTTTTTTTTCTAATTAGACTAGAATAAGTTCGAAAAAAAAAAAG
AGCAAATTAATTTAAGAAAGGTGGATTTGGCCTCCGTGAAATTAGGAGTTTCTGATGTC