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Detailed information on CNT30140604


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8GSM2|LOX23_HORVU, E-value = 5e-118

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184310Lolium perenneSecale cereale22.5827.5781.75126forward
CNT30364445Lolium perenneSorghum bicolor87.8144.4687.96490forward
CNT30104657Lolium perenneOryza rufipogon11.8323.1690.9166forward
CNT30556378Lolium perennePanicum hallii39.4330.6488.64220forward

Expression of CNT30140604

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MARGISVPSSVRKKTVRDPYNVVSGSSRTLCTYGRNTSW*

>peptide 2 (30 aa)
MEYLPGQKASSMMPSALIRASLASALISMV*

Sequence

>CNT30140604
GCGTCATAGGCGACAGAGCAGAGCTCGATGGAGTACCTACCTGGCCAGAAGGCCTCCTCTATGATGCCGTCGGCGTTGATTAGAGCCTCCCTGGCCAGCG
CGTTGATCTCCATGGTGTAGCGGAAGTGCGGGTGCAAGAGACGGTGCACCGGGTGCATCCGGCTGAGCTGCCGGTTGGTGGCGATGATGTATGGCTCGAC
GCTGGCGTGCGTGCGCAGCCAGTGGCTGACGAGCTGGTGATAGCCAGTGTCGTGGGTGAGCACGTGCGCCTTGGCCAGCTTCCACAGCCACGACTCAGTG
GCGTCAGGCCCGTGCGTAAAGGCGCGCTTCCACTGCGGCTTCGTTGGAGACTGTGGCCGTGCCAGCTCGATGGCCAGAGGCATCAGTGTGCCCTCGTCGG
TGAGGAAGAAGACGGTGCGAGACCCATACAACGTCGTGTCCGGCAGCTCGCGCACCTTGTGCACGTATGGCAGGAACACGTCGTGGTAGTCCAGCATGAA
CAGCCTCTTGTTTTCCAGCGCCTCCTCCACCGTCATCAGACCGTTCATCATTTTCTCG