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Detailed information on CNT30364445


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8GSM2|LOX23_HORVU, E-value = 2e-141

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184310Sorghum bicolorSecale cereale11.0726.786.07122forward
CNT30140604Sorghum bicolorLolium perenne44.4687.8187.96490forward
CNT30721720Sorghum bicolorTriticum spelta16.734.282.07184forward
CNT30104618Sorghum bicolorOryza rufipogon10.0740.0788.29111forward
CNT30556378Sorghum bicolorPanicum hallii23.8736.6393.16263forward

Expression of CNT30364445

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVVTQVYNPWYNTIVDQSTFYLTSSLCMQ*

>peptide 2 (66 aa)
MKSRFAATACSTVMAPFICFSRISLVMADSAGPYTSSSSLLLMGNSLRSWMHTGFRLIMARAQPCS*

>peptide 3 (56 aa)
MLRMRSLGSASVSNCHVAPYATELSSTAYFPGQKDSSMMPSALMSASLASALISMV*

>peptide 4 (66 aa)
LVVNGSNSSVQSMVQYNRRSEYILFDKQPLHAIMQPPIGSRAFFFFFLFELIGDGAERLLSLIPRN*

Sequence

>CNT30364445
TTGGTAGTAAATGGTAGTAACTCAAGTGTACAATCCATGGTACAATACAATCGTAGATCAGAGTACATTTTATTTGACAAGCAGCCTCTGCATGCAATAA
TGCAACCTCCCATTGGGAGTAGAGCTTTTTTTTTCTTTTTTCTTTTTGAACTTATTGGGGATGGAGCTGAGAGACTGTTGAGCCTGATACCAAGAAACTA
ATGCTGAGGATGAGGTCGTTGGGCAGCGCCTCCGTGTCGAACTGCCACGTCGCGCCGTACGCCACTGAGCTGAGCTCGACGGCGTACTTCCCGGGCCAGA
AGGACTCCTCGATGATGCCGTCGGCGTTGATGAGCGCCTCCCTGGCCAGCGCGTTGATCTCCATGGTGTAGCGGAAGTGCGGGTGCAGCAGGCGGTACAC
CGGGTGCAGCCGGCTCAGCTGCCGGTTGGCGGCGATGATGTAGGGCTCCACGCAGCAGTGCGTGCGCAGCCAGTGGCTGACCAGCTGGTGGTACCCCGTG
TCGTGGGTGAGCACGTGCGCCTTGGCCAGCTTCCACAGCCAGGCGTCGGTGGCGTCCGGGCCGTGCGTGAACACCCGCTTCCACTGCGGCTTGGTCGGCG
ACTTGGGGCGCGTCAGCTCGATGGCCAGCGGCATGAGCGTGCCCAGGTCCGTGAGGAAGAAGACGGTGCGGGAGCCGTAGAGCGTCGTGTCCGGCAGCTC
CCGCACCTTGTGCACGTAGGGCAGGAACACGTCGTGGTAGTCCAGGATGAAGAGCCGCTTCGCCGCCACCGCCTGCTCCACCGTCATGGCGCCGTTCATC
TGCTTCTCCAGGATCTCCTTGGTGATGGCGGACTCCGCCGGACCGTACACCTCCTCGTCCAGCTTGCTCCTGATGGGGAACTCCCTCAGGAGCTGGATGC
ACACCGGGTTCAGGTTAATCATGGCGCGCGCCCAGCCCTGTAGCTAGCTCAGGTCAGATCGGCCGGACTGGTGGTTAATTAAGCAGCAGCCAGAGCACCC
AGCAGCTGCAGCTAGCTAGCTAGCTAGCTGTGAGCGGCCGGTGACTGAAACTAGCTAGTAGTCGAGATGTGATGATGCTACTGCTAGCTGCTGCTTGGAG
TT