Detailed information on CNT30139143


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671131Lolium perenneSetaria viridis41.4438.9185.54242forward
CNT30375890Lolium perenneArabidopsis thaliana18.4927.6983.33108forward
CNT30722298Lolium perenneTriticum spelta69.0152.5491.56403forward
CNT30426981Lolium perennePapaver somniferum19.3528.4685.84113forward
CNT30150378Lolium perenneBrachypodium distachyon65.4172.3591.62382forward
CNT30495633Lolium perenneDigitaria exilis35.6239.5483.65208forward
CNT30115985Lolium perenneOryza nivara22.627.7989.39132forward

Expression of CNT30139143

Peptides detected in this lncRNA

>peptide 1 (66 aa)
AAKALSTKKLLTANNRLNQKNKPTRKMSEHHQLKLDLTHLIRGQCMEGKLPDMVQGTYSNSNSTLR*

>peptide 2 (61 aa)
MYGRKIARYGSGHILELKLNPKIVIVWDCCRNLRQPLEFDASTKNECWENPPSTEIIAFQR*

>peptide 3 (34 aa)
MARRMLAPAPLKRDLARPAPFVINQPRAKLAKKLS

>peptide 4 (30 aa)
MPPPKTNVGKIHPLQKLLPFNVKKIKFTRS*

Sequence

>CNT30139143
TGGCAGCCAAAGCATTATCTACCAAGAAATTGCTAACGGCAAACAACAGATTGAATCAAAAAAACAAGCCAACCAGGAAAATGAGTGAACACCACCAGCT
TAAACTTGACTTAACTCATTTGATCCGAGGACAATGTATGGAAGGAAAATTGCCCGATATGGTTCAGGGCACATACTCGAACTCAAACTCAACCCTAAGA
TAGTAATTGTCTGGGACTGCTGCCGCAACCTACGACAACCATTGGAGTTCGATGCCTCCACCAAAAACGAATGTTGGGAAAATCCACCCTCTACAGAAAT
TATTGCCTTTCAACGTTAAAAAGATAAAGTTCACCAGATCCTGAAAGGGCAGGACTGGGAACAGAGTTCTCTTGTTCGTCATCATTTCTCCCCATTTAGG
CACCGCCTGAGCCGTACTTCTTGCCGAAGAAGAGGATCTGGAGCTGGTCGTAGCCGGAAAGCACACCAGCACCAGCAATGGCACGGAGGATGTTGGCACC
AGCACCCTTGAAGAGAGACTTGGCAAGACCCGCACCATTTGTGATCAACCAACCAAGAGCAAAGCTGGCAAAGAAGTTGTCCTG