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Detailed information on CNT30136720

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692320	Lolium perenne	Oryza sativa	35.07	31.05	85.17	209	forward
CNT30445863	Lolium perenne	Saccharum spontaneum	35.57	19.52	84.91	212	forward
CNT3067196	Lolium perenne	Leersia perrieri	27.85	68.31	89.16	166	forward
CNT30575633	Lolium perenne	Oryza barthii	35.07	24.47	85.17	209	forward
CNT30117787	Lolium perenne	Oryza nivara	27.85	17.27	90.96	166	forward

Expression of CNT30136720

Peptides detected in this lncRNA

>peptide 1 (83 aa)
PGVLTPSIERAELVDLLGGAGVRLEGLDAIGVLHVKEPVEQHGEHLADVGVELEALPDHLVEGDEHHPALLGAAGVFLSRLSS*

Sequence

>CNT30136720
CCCCGGTGTCCTTACACCAAGCATAGAACGAGCAGAGCTCGTCGATCTGCTTGGCGGCGCTGGCGTACGCCTCGAAGGCCTTGACGCAATCGGCGTACTC
CATGTCAAAGAACCTGTCGAGCAGCACGGCGAGCACCTCGCAGATGTCGGCGTAGAGCTGGAAGCTCTCCCTGACCATCTGGTAGAGGGCGACGAGCACC
ATCCTGCTCTGCTTGGCGCCGCCGGGGTGTTCCTGTCGCGGCTGTCGTCGTAGCCTCCGTAGCCGTTCCCCGGCGGGGAGCTGTAGGAGGGCGAGCGGCG
GCCGTAGGGGTCCGGCGAGCCCCACTTGTCCCGCGGCGAGGGCCCGTTGAGGCTGCCGTTACCGTTGCCGTTGGAGGAGCCGCCGTTGCCCTGCTTGCGC
TCGTGGAGGAGGAACTCGAGGCGCTGGTCGAGGTAGAGCGCGTAGGTGCGGACGAAGGCGGAGTGGTCCCAGGAGCCCGAGTGCGCCTCGTCGCGGAAGT
CGGAGAGGTTGAGGAGGCGCGTGCCGCGGCGCGTGGCGTGCAGCAGCTCGCGGTGGAAGAAGGCGTCGCCGTCGGTGAGGAGGCGGTGCACGAGCA