Detailed information on CNT3067196


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30136720Leersia perrieriLolium perenne68.3127.8589.16166forward
CNT30117787Leersia perrieriOryza nivara91.3623.192.34222forward

Expression of CNT3067196

Peptides detected in this lncRNA

>peptide 1 (59 aa)
PSGHAATGHWHWSWGWSWSPACAHGGRTQGAGRGTTHKYERRRNGPMSRSVPRRGSRRG*

>peptide 2 (46 aa)
PAVTRRRAIGTGAGVGVGALLALMEEELKALVEVQRISTNEGGMVP*

>peptide 3 (37 aa)
PQRSRGDGPLALELGLELEPCLRSWRKNSRRWSRYNA*

Sequence

>CNT3067196
CCCCAGCGGTCACGCGGCGACGGGCCATTGGCACTGGAGCTGGGGTTGGAGTTGGAGCCCTGCTTGCGCTCATGGAGGAAGAACTCAAGGCGCTGGTCGA
GGTACAACGCATAAGTACGAACGAAGGCGGAATGGTCCCATGAGCCGGAGTGTGCCTCGTCGCGGAAGTCGGAGAGGTTGAGGAGGCGGGTGCCCCGGCG
CGTGGCGTGGAGGATCTCGCGGATGTGGCGCTCCTCGGCCGGC