Detailed information on CNT30135896


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677963Lolium perenneSetaria viridis35.0873.8584.47161forward
CNT30458221Lolium perenneSaccharum spontaneum21.5733.2288.8999forward
CNT30361620Lolium perenneSorghum bicolor23.9722.0981.82110forward

Expression of CNT30135896

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MFTGPFRFLSDGSVFMAVIRFSISISRVPNLLNASSALASDVHSGVSRCPRYT

>peptide 2 (36 aa)
MNETYTLHCTRHKATTETSDGDAVGDAHAGESEVLG*

>peptide 3 (31 aa)
METLLGMPMPVSPKCWGKEACRACSQARSGS*

Sequence

>CNT30135896
GGACTTTGTTTAAGTGATGCAAACTGCAATTAACTCTTATTTCTGGAGATAAAAATGTACAGCTGATTTCTTACTGATGCCTCAGTACCGTCTTCTCCTC
TCTCTATCAGCGGCATCACCTCCCATCATCCACTAATCCCTGACAAACAATTACCCCGACTACATTGCAAAAAAATGAACGAAACATACACTCTGCACTG
CACGAGACACAAAGCCACGACGGAGACCTCAGATGGAGACGCTGTTGGGGATGCCCATGCCGGTGAGTCCGAAGTGTTGGGGTAAAGAAGCGTGTAGGGC
ATGTTCACAGGCCCGTTCCGGTTCTTGAGCGACGGGTCCGTGTTCATGGCCGTGATCCGCTTCTCGATCTCGATCAGTCGGGTGCCGAACCTCTTGAACG
CCTCCAGCGCCTTGGCGTCCGACGTCCACTCCGGCGTGTCGCGCTGCCCGAGGTACACC