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Detailed information on CNT30123772


BLAST search results

BLAST vs Swiss-Prot:
sp|P20866|CB2_PHYPA, E-value = 4e-42

BLAST vs NONCODE:
NONBNAT007398, E-value = 4e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234693Physcomitrium patensBrassica oleracea41.3640.585.88177forward
CNT3078263Physcomitrium patensBrassica juncea41.1222.6285.8176forward
CNT30417231Physcomitrium patensPapaver somniferum41.1223.6685.8176forward

Expression of CNT30123772

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MANRPFLISFTFNSAKVSGSEESPAVSHP*

Sequence

>CNT30123772
ATCTCACTCATTGCAGCCACAATAGGTAGATAGTTCCCGATAGATTAAAAAGCCCCGTCTTACATTGCTAAAGATCTATGATACAATTCTCAATCACAGC
GACATGTTCATGTCAATAGTCTAGTTCCCGGGAACGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGGCAACGGGGTCGGCCAAGTGGTCGTTCAAGTTCT
CCAATGGGCCCTTTCCGGTCACGATAGCCTGAACGAAGAATCCGAACATCGAGAACATGGCCAATCGCCCGTTCTTGATCTCCTTCACCTTCAACTCAGC
GAAGGTCTCGGGGTCGGAGGAGAGTCCAGCGGTGTCCCATCCGTAGTCACCAGCGAACTCACCGTTAAGGTATGAGGGGGTCTCACCGGAAAATGGGCCC
AAATACTTGGGTCTGTCAGCTCCATACC