Detailed information on CNT30101529


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XTG7|HCAR_ORYSJ, E-value = 8e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370107Oryza rufipogonOryza glumipatula83.1410099.53212forward
CNT30576171Oryza rufipogonOryza barthii10098.4699.61255forward
CNT30116500Oryza rufipogonOryza nivara10078.95100255forward

Expression of CNT30101529

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MRNVVGVTKPTLAAVVLGWVDATRRDGLGSLPPILPQRPN*

Sequence

>CNT30101529
CCTCGACACGGGACATGCCATCTCCTAGGAATGCGCAGGCATTCTTGACATGCGCAATGTAGTAGGTGTCACAAAGCCCACATTGGCTGCAGTGGTCCTT
GGCTGGGTAGACGCCACCAGGAGGGATGGCCTTGGATCTCTCCCTCCAATCCTCCCGCAGCGCCCTAATTGACCCGCAACTCGTTTTCCTACCTCGGCAT
TGATGAGAGGACGGAGACGAGGGTAAGACAGAGGACACTGAGCAGCAGGGCGGTT