Detailed information on CNT30116500


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370107Oryza nivaraOryza glumipatula65.6310099.53212forward
CNT30101529Oryza nivaraOryza rufipogon78.95100100255forward
CNT30576171Oryza nivaraOryza barthii80.1910099.61259forward

Expression of CNT30116500

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MRNVVGVTKPTLAAVVLGWVDATRRDGLGSLPPILPQRPN*

Sequence

>CNT30116500
CCTCGACACGGGACATGCCATCTCCTAGGAATGCGCAGGCATTCTTGACATGCGCAATGTAGTAGGTGTCACAAAGCCCACATTGGCTGCAGTGGTCCTT
GGCTGGGTAGACGCCACCAGGAGGGATGGCCTTGGATCTCTCCCTCCAATCCTCCCGCAGCGCCCTAATTGACCCGCAACTCGTTTTCCTACCTCGGCAT
TGATGAGAGGACGGAGACGAGGGTAAGACAGAGGACACTGAGCAGCAGGGCGGTTTTGTGGGACATGGCAAGGACGAGGAGGTAGACAGGAAGGAGATGC
ACCGCGCCATGGATATTGAATAG