SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3362 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30379825 Manihot esculenta LG13:18880739-18881381 (+) noncoding (-0.024576)0.00000000002 (sp|O65665|ERF60_ARATH) 31 0 2
CNT30379824 Manihot esculenta LG13:10952501-10956802 (-) noncoding (-0.045056)- 66 11.87 3
CNT30379823 Manihot esculenta LG13:14328278-14330082 (-) noncoding (-0.0004096)- - 3.37 2
CNT30379820 Manihot esculenta LG13:11206138-11206705 (+) noncoding (-0.0004096)- 37 7.04 1
CNT30379819 Manihot esculenta LG13:1617757-1622060 (+) noncoding (-0.022528)- 71 18.22 5
CNT30379818 Manihot esculenta LG13:27338406-27340118 (-) noncoding (-0.0233472)- 57 39.86 1
CNT30379816 Manihot esculenta LG13:24974688-24978050 (+) noncoding (-0.1024)- 48 9.07 2
CNT30379815 Manihot esculenta LG13:1648451-1649907 (-) noncoding (-3.25222)- 82 22 2
CNT30379814 Manihot esculenta LG13:20636839-20683798 (-) noncoding (-0.0004096)- 46 0.9 2
CNT30379813 Manihot esculenta LG13:25793159-25795003 (+) noncoding (-0.118784)2e-24 (sp|O49353|BG5_ARATH) 57 13.38 2
CNT30379812 Manihot esculenta LG13:8631772-8641725 (+) noncoding (-0.0004096)- 38 0.99 2
CNT30379811 Manihot esculenta LG13:26046258-26047071 (-) noncoding (-0.049152)1e-37 (sp|P26320|PSBO_SOLTU) 45 2.46 2Conserved counterparts:
CNT30379810 Manihot esculenta LG13:8918406-8921641 (+) noncoding (-0.077824)- 46 5.52 5
CNT30379809 Manihot esculenta LG13:1209425-1210100 (+) noncoding (-0.045056)3e-38 (sp|P51413|RL172_ARATH) 43 14.09 3
CNT30379807 Manihot esculenta LG13:8640627-8641673 (+) noncoding (-0.0004096)- 46 0.23 2
CNT30379806 Manihot esculenta LG13:9106290-9110145 (+) noncoding (-0.0147456)- 72 22.29 2
CNT30379805 Manihot esculenta LG13:2115789-2117536 (+) noncoding (-0.073728)5e-54 (sp|Q9LIP4|C71BX_ARATH) 44 6.73 4
CNT30379804 Manihot esculenta LG13:2263896-2283945 (+) noncoding (-0.0765952)4e-16 (sp|Q9LRV8|PIRL2_ARATH) 78 9.63 2
CNT30379803 Manihot esculenta LG13:2278120-2278455 (-) noncoding (-0.0004096)- 39 0.48 1
CNT30379802 Manihot esculenta LG13:25127575-25139235 (-) noncoding (-0.1024)- 49 2.39 2
CNT30379801 Manihot esculenta LG13:16628183-16663178 (-) noncoding (-0.012288)- - 30.7 2
CNT30379800 Manihot esculenta LG13:11214295-11218130 (-) noncoding (-0.0004096)- 33 11.33 2
CNT30379799 Manihot esculenta LG13:24983224-24986913 (-) coding (0.01)- 86 10.64 4
CNT30379798 Manihot esculenta LG13:6092117-6092416 (-) noncoding (-0.0004096)- - 248.91 1
CNT30379796 Manihot esculenta LG13:24277143-24278378 (-) coding (0.467)- 57 0.42 2
CNT30379795 Manihot esculenta LG13:22328653-22336584 (+) noncoding (-0.0098304)1e-51 (sp|W8JDE0|ADH9_CATRO) 88 2.64 2
CNT30379794 Manihot esculenta LG13:2629076-2630433 (+) noncoding (-0.0118784)5e-72 (sp|Q9LDE3|FBK9_ARATH) 60 5.1 4
CNT30379793 Manihot esculenta LG13:8835772-8836456 (+) noncoding (-0.057344)- 48 4.18 1
CNT30379792 Manihot esculenta LG13:28027853-28031293 (+) noncoding (-0.0004096)6e-21 (sp|Q10P01|LCB1A_ORYSJ) 93 13.86 2
CNT30379791 Manihot esculenta LG13:7778015-7778969 (-) noncoding (-0.131072)- 58 7.7 1
CNT30379790 Manihot esculenta LG13:10945758-10956894 (-) noncoding (-0.028672)- 97 7.03 2
CNT30379789 Manihot esculenta LG13:27864637-27865532 (+) noncoding (-0.159744)- 85 25.88 1
CNT30379788 Manihot esculenta LG13:24277145-24278282 (-) coding (0.552)- 79 0.3 2
CNT30379787 Manihot esculenta LG13:27374637-27375122 (+) noncoding (-0.0004096)- - 13.47 2
CNT30379786 Manihot esculenta LG13:6054650-6059063 (-) noncoding (-0.294912)- 49 14.14 3
CNT30379785 Manihot esculenta LG13:266066-268759 (+) noncoding (-0.08192)- 80 4.48 4
CNT30379783 Manihot esculenta LG13:24155275-24155619 (+) noncoding (-0.0106496)0.00000003 (sp|Q9FPQ6|GP1_CHLRE) - 1.21 2
CNT30379782 Manihot esculenta LG13:6293561-6294334 (-) noncoding (-0.0094208)2e-94 (sp|P27522|CB13_SOLLC) 62 0.71 2Conserved counterparts:
CNT30379781 Manihot esculenta LG13:11823839-11825615 (-) noncoding (-0.0110592)- 77 12.26 2
CNT30379780 Manihot esculenta LG13:11833712-11834250 (-) noncoding (-0.159334)- 57 1.32 1
CNT30379779 Manihot esculenta LG13:25246767-25251723 (+) noncoding (-0.0176128)1e-24 (sp|P31843|RRPO_OENBE) 66 2.39 1
CNT30379777 Manihot esculenta LG13:26153043-26153722 (-) noncoding (-0.049152)- 30 25.28 2
CNT30379774 Manihot esculenta LG13:8631771-8641721 (+) noncoding (-0.0004096)- 38 0.55 2
CNT30379773 Manihot esculenta LG13:24416769-24443184 (-) noncoding (-0.0147456)3e-84 (sp|W8JMU7|CYQ32_CATRO) 38 11.17 2
CNT30379772 Manihot esculenta LG13:25127536-25139204 (-) noncoding (-0.1024)- 49 3.9 3
CNT30379770 Manihot esculenta LG13:2755767-2756664 (-) noncoding (-0.032768)4e-21 (sp|O22693|GOLS4_ARATH) 66 5.08 2Conserved counterparts:
CNT30379769 Manihot esculenta LG13:11276354-11291020 (+) noncoding (-0.0004096)- 34 11.88 2
CNT30379767 Manihot esculenta LG13:11228992-11229310 (-) noncoding (-0.0004096)0.000000002 (sp|Q84P23|4CLL9_ARATH) 37 12.75 1
CNT30379766 Manihot esculenta LG13:23127069-23127798 (-) noncoding (-0.090112)0.000000000002 (sp|Q9ZT94|POLR2_ARATH) 87 19.87 1
CNT30379765 Manihot esculenta LG13:8823803-8824252 (-) noncoding (-0.024576)- 54 14.13 1