SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3025536 Populus trichocarpa 13:5024738-5025655 (-) noncoding (-0.0004096)- 81 12.44 1
CNT3025535 Populus trichocarpa 13:13041185-13041738 (+) noncoding (-0.114688)- - 13.91 2
CNT3025534 Populus trichocarpa 13:5001003-5001983 (+) noncoding (-0.024576)- 57 12.25 2
CNT3025533 Populus trichocarpa 13:7006911-7053132 (+) noncoding (-0.088064)- - 15.72 2
CNT3025532 Populus trichocarpa 13:6579178-6589174 (+) noncoding (-0.176128)5e-62 (sp|Q42602|C89A2_ARATH) 53 0.97 2
CNT3025531 Populus trichocarpa 13:15545260-15560886 (+) coding (0.22)4e-48 (sp|Q8LEE9|FLA12_ARATH) 50 0.16 3
CNT3025530 Populus trichocarpa 13:13988159-13990085 (-) noncoding (-0.049152)2e-24 (sp|Q9M199|IQD13_ARATH) 96 219.35 2
CNT3025529 Populus trichocarpa 13:13948545-13948940 (-) noncoding (-0.12288)- 45 36.64 1
CNT3025528 Populus trichocarpa 13:13451562-13498342 (+) noncoding (-0.0004096)- 72 14.34 2
CNT3025526 Populus trichocarpa 13:7987327-7987653 (+) noncoding (-0.073728)- 42 163.11 1
CNT3025525 Populus trichocarpa 13:210368-216757 (+) noncoding (-0.12288)- 53 11.77 2
CNT3025523 Populus trichocarpa 13:9084775-9088865 (+) noncoding (-0.028672)- 52 6.83 5
CNT3025520 Populus trichocarpa 13:4143928-4145340 (-) noncoding (-0.0139264)- 65 5.61 2
CNT3025519 Populus trichocarpa 13:209782-210154 (+) noncoding (-0.131072)- 43 71.43 1
CNT3025518 Populus trichocarpa 13:11825925-11826259 (+) noncoding (-0.0004096)- - 37.94 1
CNT3025517 Populus trichocarpa 13:6546863-6589368 (+) noncoding (-0.135168)2e-68 (sp|Q42602|C89A2_ARATH) 52 3.22 3
CNT3025516 Populus trichocarpa 13:2569805-2570414 (-) noncoding (-0.0004096)- 56 70.23 1
CNT3025515 Populus trichocarpa 13:4200659-4202834 (+) noncoding (-0.0004096)- 32 7.66 2
CNT3025514 Populus trichocarpa 13:5921071-5922227 (-) noncoding (-0.0323584)- 97 23.1 2
CNT3025513 Populus trichocarpa 13:13156695-13158578 (-) noncoding (-0.0004096)- 30 4.17 3
CNT3025512 Populus trichocarpa 13:15063357-15063765 (-) noncoding (-0.077824)0.0000000000001 (sp|Q06BH3|SRF1_ARATH) - 2.79 2
CNT3025511 Populus trichocarpa 13:8879912-8880551 (+) noncoding (-0.0004096)- - 118.3 2
CNT3025510 Populus trichocarpa 13:13878875-13882218 (-) noncoding (-0.02048)- - 12.15 2
CNT3025509 Populus trichocarpa 13:15239152-15240000 (-) noncoding (-0.0454656)- 72 11.54 1
CNT3025507 Populus trichocarpa 13:9084775-9088822 (+) noncoding (-0.212173)- 47 23.29 6
CNT3025506 Populus trichocarpa 13:11475810-11476370 (+) noncoding (-0.262963)- 55 15.98 1
CNT3025505 Populus trichocarpa 13:973132-974175 (+) noncoding (-0.0319488)- 41 10.25 1
CNT3025504 Populus trichocarpa 13:15003725-15004202 (-) noncoding (-0.126976)- 58 28.88 2
CNT3025503 Populus trichocarpa 13:2783703-2786972 (+) noncoding (-0.0323584)- 46 8.28 3
CNT3025502 Populus trichocarpa 13:6515267-6515598 (+) noncoding (-0.0004096)- - 16.7 1
CNT3025501 Populus trichocarpa 13:14283126-14286530 (+) noncoding (-0.0319488)- 52 71.49 3
CNT3025500 Populus trichocarpa 13:6907603-6909146 (+) noncoding (-0.057344)- 70 6.35 2
CNT3025499 Populus trichocarpa 13:280425-281551 (+) noncoding (-0.0978944)5e-67 (sp|P31156|METK2_PETCR) 81 95.54 2
CNT3025498 Populus trichocarpa 13:13878145-13881628 (-) noncoding (-0.0004096)- 36 13.02 2
CNT3025497 Populus trichocarpa 13:3226613-3226879 (+) noncoding (-0.022528)- 72 304.6 1
CNT3025496 Populus trichocarpa 13:7005608-7032000 (+) noncoding (-0.02048)2e-21 (sp|Q09117|BSPB_POPDE) - 30.99 2
CNT3025495 Populus trichocarpa 13:16138817-16169008 (-) noncoding (-0.057344)1e-24 (sp|C0LGD7|Y1684_ARATH) 84 47.1 2
CNT3025494 Populus trichocarpa 13:13035129-13035990 (-) noncoding (-0.0159744)- 99 115.65 2
CNT3025493 Populus trichocarpa 13:16136153-16166570 (-) noncoding (-0.0753664)9e-54 (sp|C0LGD7|Y1684_ARATH) - 5.91 2
CNT3025492 Populus trichocarpa 13:15149668-15150161 (-) noncoding (-0.0004096)- - 22.38 1
CNT3025491 Populus trichocarpa 13:15545260-15560886 (+) coding (0.22)4e-48 (sp|Q8LEE9|FLA12_ARATH) 50 14.5 2
CNT3025490 Populus trichocarpa 13:6578255-6588185 (+) noncoding (-0.0004096)6e-55 (sp|Q42602|C89A2_ARATH) 33 63.29 2
CNT3025489 Populus trichocarpa 13:4935970-4937794 (-) noncoding (-0.065536)- 59 1.12 1
CNT3025488 Populus trichocarpa 13:4468069-4471560 (+) noncoding (-0.086016)0.0000000004 (sp|Q84V39|ALL10_OLEEU) 60 9.84 4
CNT3025487 Populus trichocarpa 13:11269200-11296962 (-) noncoding (-0.0004096)- - 2673.63 2
CNT3025486 Populus trichocarpa 13:960716-960937 (-) noncoding (-0.0004096)- - 54.01 1
CNT3025484 Populus trichocarpa 13:15771299-15771514 (-) noncoding (-0.0970752)- 33 427.25 1
CNT3025483 Populus trichocarpa 13:1629755-1630640 (-) noncoding (-0.0004096)- 41 14.93 1
CNT3025482 Populus trichocarpa 13:928224-928712 (-) noncoding (-0.0004096)0.00000000002 (sp|Q9M015|Y5161_ARATH) 41 10.91 2
CNT3025481 Populus trichocarpa 13:15841976-15843712 (+) noncoding (-0.0004096)- 35 900.27 3