SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3025592 Populus trichocarpa 13:16038240-16040760 (+) noncoding (-0.114688)- 52 0.2 3
CNT3025591 Populus trichocarpa 13:11966233-11966872 (+) noncoding (-0.128614)- 80 32.49 2
CNT3025590 Populus trichocarpa 13:8202680-8203268 (+) noncoding (-0.135168)- 39 113.39 2
CNT3025589 Populus trichocarpa 13:13288949-13289561 (-) coding (0.458)- 86 5.98 2
CNT3025588 Populus trichocarpa 13:493381-493807 (-) noncoding (-0.0004096)- 44 29.42 1
CNT3025586 Populus trichocarpa 13:10688362-10729535 (-) noncoding (-0.0004096)3e-32 (sp|Q9SSN3|TIR_ARATH) 59 0.2 3
CNT3025585 Populus trichocarpa 13:14661186-14661606 (-) noncoding (-0.0004096)8e-75 (sp|Q14FB9|RR3_POPAL) 65 654.64 1
CNT3025584 Populus trichocarpa 13:15545260-15553720 (+) coding (0.22)2e-16 (sp|Q8LEE9|FLA12_ARATH) 80 0 4
CNT3025583 Populus trichocarpa 13:3583800-3585150 (-) noncoding (-0.0004096)- 53 16.24 3
CNT3025582 Populus trichocarpa 13:13913047-13913437 (+) noncoding (-0.0004096)- 31 2.54 1
CNT3025581 Populus trichocarpa 13:10112862-10120386 (-) noncoding (-0.0004096)- - 13.77 2
CNT3025580 Populus trichocarpa 13:8469991-8470515 (-) noncoding (-0.0004096)- 52 70.17 1
CNT3025579 Populus trichocarpa 13:16068225-16069446 (-) coding (0.498)- 91 9.48 2
CNT3025578 Populus trichocarpa 13:982594-984350 (-) coding (0.108)- 72 10.36 2
CNT3025575 Populus trichocarpa 13:7453432-7499035 (-) noncoding (-0.083968)9e-29 (sp|Q09117|BSPB_POPDE) 52 46.94 2
CNT3025574 Populus trichocarpa 13:1773015-1773616 (+) noncoding (-0.121242)- 30 42.74 1
CNT3025573 Populus trichocarpa 13:10112638-10120091 (+) noncoding (-0.0004096)- - 5.34 2
CNT3025572 Populus trichocarpa 13:1723769-1729645 (+) noncoding (-0.0004096)- 32 31.37 2
CNT3025571 Populus trichocarpa 13:7383428-7385436 (+) noncoding (-0.073728)- 43 17.23 2
CNT3025570 Populus trichocarpa 13:15695385-15696700 (-) noncoding (-0.151552)- 43 15.9 1
CNT3025569 Populus trichocarpa 13:12696748-12697784 (+) noncoding (-0.0004096)- 73 6.87 1
CNT3025568 Populus trichocarpa 13:3516604-3517098 (+) noncoding (-0.0004096)- 51 88.26 1
CNT3025567 Populus trichocarpa 13:12821872-12822284 (-) noncoding (-0.0004096)- 52 27.4 1
CNT3025565 Populus trichocarpa 13:2932168-2945122 (-) noncoding (-0.04096)2e-58 (sp|P43082|HEVL_ARATH) 62 30.8 2
CNT3025564 Populus trichocarpa 13:5123024-5128192 (+) noncoding (-0.045056)- 43 4.96 5
CNT3025563 Populus trichocarpa 13:738633-740747 (-) noncoding (-0.0421888)- 97 3.82 2
CNT3025562 Populus trichocarpa 13:13492016-13495617 (-) noncoding (-0.0004096)- 70 8.61 2
CNT3025561 Populus trichocarpa 13:12631325-12631568 (+) noncoding (-0.0004096)- 51 28.49 1
CNT3025559 Populus trichocarpa 13:13744218-13744463 (-) noncoding (-0.0004096)- - 104.41 1
CNT3025558 Populus trichocarpa 13:14752951-14753760 (+) noncoding (-0.0425984)- 37 1156.06 1
CNT3025557 Populus trichocarpa 13:13580618-13591086 (+) noncoding (-0.036864)- 58 0 2
CNT3025556 Populus trichocarpa 13:9084775-9088865 (+) noncoding (-0.028672)- 52 10.27 5
CNT3025555 Populus trichocarpa 13:16014595-16014838 (-) noncoding (-0.0004096)- 41 26.81 1
CNT3025554 Populus trichocarpa 13:4780915-4782117 (-) noncoding (-0.0004096)- 75 14.23 2
CNT3025553 Populus trichocarpa 13:3814214-3815528 (+) coding (0.049)- 55 14.97 1
CNT3025552 Populus trichocarpa 13:7005646-7051740 (+) noncoding (-0.19456)- 41 1 2
CNT3025551 Populus trichocarpa 13:3949581-3950530 (+) noncoding (-0.0106496)- 58 2.55 2
CNT3025550 Populus trichocarpa 13:15149668-15150161 (-) noncoding (-0.0004096)- - 0.9 2
CNT3025549 Populus trichocarpa 13:2763585-2772331 (+) noncoding (-0.0004096)- 48 32.09 2
CNT3025548 Populus trichocarpa 13:2932168-2945127 (-) coding (0.161)7e-66 (sp|P02877|HEVE_HEVBR) 63 11.93 2
CNT3025547 Populus trichocarpa 13:7443008-7443234 (+) noncoding (-0.0004096)- - 50.92 1
CNT3025546 Populus trichocarpa 13:11348410-11348838 (+) noncoding (-0.57344)- 85 194.88 2
CNT3025545 Populus trichocarpa 13:15545260-15560886 (+) coding (0.231)1e-42 (sp|Q8LEJ6|FLA11_ARATH) 59 4.88 4
CNT3025543 Populus trichocarpa 13:15002285-15005368 (-) noncoding (-0.073728)0.0000006 (sp|P47925|CWPX_ARATH) 91 0.38 3
CNT3025542 Populus trichocarpa 13:16211803-16218167 (+) noncoding (-0.02048)- 84 0.46 2
CNT3025541 Populus trichocarpa 13:10643725-10646356 (-) noncoding (-0.0004096)- 45 27.82 2
CNT3025540 Populus trichocarpa 13:14549287-14550180 (+) noncoding (-0.0004096)- 62 4.3 2
CNT3025539 Populus trichocarpa 13:889534-890101 (-) noncoding (-0.0004096)- 37 29.52 2
CNT3025538 Populus trichocarpa 13:11766894-11768724 (+) noncoding (-0.053248)2e-50 (sp|Q9ZT94|POLR2_ARATH) 51 4.79 2
CNT3025537 Populus trichocarpa 13:14808221-14831301 (-) noncoding (-0.139674)0.0000001 (sp|Q7J1C5|PSBF_ACOCL) 45 4678.36 2