SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3022866 Populus trichocarpa 3:11596044-11597622 (-) noncoding (-0.753664)- 62 2.27 2
CNT3022865 Populus trichocarpa 3:10744850-10745675 (+) noncoding (-0.126976)3e-31 (sp|Q1JPM5|OFT30_ARATH) 58 12.44 2
CNT3022864 Populus trichocarpa 3:14832542-14833084 (+) noncoding (-0.0004096)- 72 22.67 1
CNT3022863 Populus trichocarpa 3:13750631-13751228 (-) noncoding (-0.022528)- 36 9.48 2
CNT3022862 Populus trichocarpa 3:5040779-5040993 (-) noncoding (-0.0004096)- - 119.69 1
CNT3022861 Populus trichocarpa 3:16475951-16480237 (+) coding (0.138)- 43 10.61 2
CNT3022860 Populus trichocarpa 3:7472097-7472776 (-) noncoding (-0.0004096)- 43 131.83 2
CNT3022859 Populus trichocarpa 3:10726233-10726826 (-) noncoding (-0.012288)- - 106.84 2
CNT3022858 Populus trichocarpa 3:19077388-19077940 (+) noncoding (-0.0004096)- - 131.82 1
CNT3022857 Populus trichocarpa 3:18508690-18522569 (-) noncoding (-0.0192512)5e-124 (sp|Q9FUB7|CHSY_HYPAN) 97 77.25 2
CNT3022856 Populus trichocarpa 3:21701783-21702230 (-) noncoding (-0.0004096)- 61 4.6 2
CNT3022855 Populus trichocarpa 3:18508318-18515297 (-) coding (0.221)1e-156 (sp|Q9FUB7|CHSY_HYPAN) 41 333.88 2
CNT3022854 Populus trichocarpa 3:20772211-20773859 (+) noncoding (-0.0364544)4e-35 (sp|Q6NQJ7|FRS4_ARATH) 65 15.3 2
CNT3022853 Populus trichocarpa 3:9768544-9770480 (+) noncoding (-0.008192)- - 12.53 3
CNT3022852 Populus trichocarpa 3:3484873-3485489 (-) noncoding (-0.0004096)- 60 6.86 2
CNT3022851 Populus trichocarpa 3:10272605-10274086 (-) noncoding (-0.14295)- 54 10.79 2
CNT3022850 Populus trichocarpa 3:12401386-12402059 (+) noncoding (-0.0004096)- 56 71.07 2
CNT3022848 Populus trichocarpa 3:17612548-17618847 (-) noncoding (-0.0004096)2e-30 (sp|Q9LYV6|GEML5_ARATH) 69 62.97 2
CNT3022847 Populus trichocarpa 3:21025996-21043987 (+) noncoding (-0.0905216)- 45 6.35 4
CNT3022846 Populus trichocarpa 3:12963319-12963925 (-) noncoding (-0.128205)- 65 16.69 2
CNT3022845 Populus trichocarpa 3:1461066-1461524 (+) noncoding (-0.016384)- 34 81.8 2
CNT3022844 Populus trichocarpa 3:8187810-8188477 (+) noncoding (-0.0004096)- 49 10.1 1
CNT3022843 Populus trichocarpa 3:7907754-7908427 (-) noncoding (-0.171622)- - 1.56 2
CNT3022842 Populus trichocarpa 3:19114746-19115429 (+) noncoding (-0.217088)- 53 21 2
CNT3022841 Populus trichocarpa 3:2953364-2973935 (+) noncoding (-0.108954)6e-54 (sp|Q9ZP55|DRP4C_ARATH) 44 3.87 2
CNT3022840 Populus trichocarpa 3:18514558-18522501 (-) noncoding (-0.0512)0 (sp|P48386|CHS1_CAMSI) 75 14.67 2
CNT3022838 Populus trichocarpa 3:15103690-15104782 (-) noncoding (-0.0004096)- 100 6.56 3
CNT3022837 Populus trichocarpa 3:8472113-8500083 (-) noncoding (-0.167936)1e-57 (sp|Q9SND9|Y3028_ARATH) 40 1.52 2
CNT3022836 Populus trichocarpa 3:11264278-11264934 (-) noncoding (-0.0004096)- 36 36.66 1
CNT3022834 Populus trichocarpa 3:17917587-17989446 (-) noncoding (-0.049152)2e-16 (sp|Q8GY11|WRK43_ARATH) - 1049.39 2
CNT3022833 Populus trichocarpa 3:3416427-3417533 (-) noncoding (-0.147456)- 65 8.02 3
CNT3022832 Populus trichocarpa 3:3510376-3510736 (+) noncoding (-0.0004096)- - 1.82 2
CNT3022831 Populus trichocarpa 3:13105615-13106022 (+) noncoding (-0.0004096)- 39 18.9 1
CNT3022830 Populus trichocarpa 3:20062106-20063053 (+) noncoding (-0.155648)- 88 22.24 1
CNT3022829 Populus trichocarpa 3:3489870-3491120 (-) noncoding (-0.0028672)- 93 4.05 2
CNT3022828 Populus trichocarpa 3:10291191-10292950 (+) noncoding (-0.04096)- 40 26.06 4
CNT3022827 Populus trichocarpa 3:5472981-5473670 (+) noncoding (-0.0004096)- - 18.12 1
CNT3022826 Populus trichocarpa 3:20050994-20051355 (+) noncoding (-0.0004096)- - 17.12 1
CNT3022825 Populus trichocarpa 3:17769454-17770056 (-) noncoding (-0.094208)- 35 15.21 1
CNT3022824 Populus trichocarpa 3:21025996-21048145 (+) noncoding (-0.012288)- 45 0.37 3
CNT3022823 Populus trichocarpa 3:10044259-10044886 (+) noncoding (-0.0212992)2e-102 (sp|Q9LUM3|SBT15_ARATH) 69 69.71 2
CNT3022822 Populus trichocarpa 3:21700694-21702230 (-) noncoding (-0.0032768)2e-47 (sp|Q9LJE5|ECT2_ARATH) 79 0.39 3
CNT3022821 Populus trichocarpa 3:432012-437170 (-) noncoding (-0.036864)9e-53 (sp|Q9C9D0|SOT16_ARATH) 35 8.82 2
CNT3022820 Populus trichocarpa 3:19687000-19688749 (-) noncoding (-0.0004096)- 43 1.68 3
CNT3022819 Populus trichocarpa 3:12524565-12534806 (-) noncoding (-0.0032768)2e-33 (sp|P0DO10|PIKS2_ORYSJ) 85 7.74 2
CNT3022818 Populus trichocarpa 3:9673467-9674235 (+) noncoding (-0.0004096)- 34 51.31 1
CNT3022817 Populus trichocarpa 3:13230828-13231319 (+) noncoding (-0.0290816)- 44 212.48 2
CNT3022816 Populus trichocarpa 3:16218278-16219399 (-) noncoding (-0.0417792)- 54 3.42 2
CNT3022815 Populus trichocarpa 3:20984549-20988262 (+) noncoding (-0.0253952)- 38 12.9 3
CNT3022814 Populus trichocarpa 3:8862637-8871487 (-) noncoding (-0.176128)- 53 52.88 2