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Detailed information on CNT3096535


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Solanum tuberosumOryza sativa16.3920.0592.580forward
CNT30217757Solanum tuberosumKalanchoe fedtschenkoi17.4221.292.9485forward
CNT30620847Solanum tuberosumCajanus cajan16.1922.0796.279forward
CNT30154619Solanum tuberosumPrunus persica16.820.292.6882forward

Expression of CNT3096535

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MKNLNLLFHIHLEVFIGVTSVIRYFWQSLATLLIDFSELVYPM*

Sequence

>CNT3096535
TATTAATTAAATTAAATATAAATACATTGAACCCCAGCCCCACTGTCCACTACGATTAGGGTTTTGGGTTTTCCAAAGGTTAGCAGACGTTCAATTTCTC
TGTCGCCATGAGAGCTAAGTGGAAGAAGAAGAGAATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAAAGATCCAAGTAGTCCTTTTCCTACTTT
GTTCGTGTCGTTTGATTGACTTTTGTTCTAGGGTTTTGAATCTTATTTTGTCCCTAAAATTTCTCAGTTATTGATGAAAAACTTGAATTTGTTATTTCAC
ATACATTTGGAAGTTTTTATCGGAGTTACCTCAGTTATTCGATATTTTTGGCAATCCTTAGCTACTCTATTAATTGATTTTTCTGAACTTGTGTATCCAA
TGTGATTTGAATTGAATCTTGTGCAAGCTTCTCTTTAGGAGTTGGCCTGTATTGAACTTAGGCTACTTGATTAAGGTCATGTTGGAGC