« Back to Solanum tuberosum search


Detailed information on CNT3093222


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317870Solanum tuberosumCorylus avellana27.4110.5484.0494forward
CNT30491958Solanum tuberosumOlea europaea24.789.2984.7185forward
CNT30559710Solanum tuberosumActinidia chinensis25.365.0986.2187forward

Expression of CNT3093222

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MKCIVGLDFGVSSKHELASLMIKTKTSFTPSSGYGRRSSSKSLSCTSLVDGFARRVRYSPRCFPLITSNANTPKL*

Sequence

>CNT3093222
CGGAGATGCTTTTCGCCTTCATAGAGGTTATTTGAGAAACAGGTGGATCCATTGACAACATACTGGAGATGAAGTGCATTGTTGGCCTTGATTTTGGAGT
TTCAAGCAAACATGAGCTTGCTAGCTTGATGATAAAAACCAAAACCTCTTTTACTCCATCTTCAGGATATGGAAGGCGTTCATCTAGCAAATCACTTAGC
TGCACATCTCTTGTTGATGGATTTGCTAGAAGAGTAAGGTATTCCCCAAGATGCTTTCCTTTGATTACCTCCAATGCTAATACTCCAAAGCTGTAGACGT
CACACATTTCCGTCACCTTCAATGTATAGGCAAGCTCTGAAAC