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Detailed information on CNT30491958


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZU4|CRK4_ARATH, E-value = 6e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3093222Olea europaeaSolanum tuberosum9.2924.7884.7185forward

Expression of CNT30491958

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKSLMRSFIGTSENPSKEQKYIKTIGIICKLS*

>peptide 2 (67 aa)
MHLVASLTMNIKISSSLGLGYRMRGSKKSLNCNSPCLRLSPGRFPLITSKANTPKLYTSHFSVTFIV*

>peptide 3 (68 aa)
MSETVTRTISFDHFQSQHSKAVHITLFCHFHCVSKLCQSISEQIQLKSCMNNLWMIYMKKEKILPGAT*

>peptide 4 (31 aa)
MYEQSVDDIYEKRKNITRCNITICACKSAQI*

Sequence

>CNT30491958
TCCGTTTCATAGAGAAATTGCTTCAACGGCAAAGGTAGAAGCAGAAGCAAAAGCAAGTCTAGGATAAATAAAAGAGAAAAGTAATGACGATATCACAAAC
TCGATATCATCTATACGACTCGATGAATCATTAACTCAAAGGATAGAAATCTTTCCACATCTTAAAACAATTTAAAGCCTTGCTGCAAGGTAGTCTTGCC
ATATCCACTAGTTTAGTTACAACACAACAATATTCATAGCAAACCTTAAACAATGAAAAGTTTGATGCGTAGTTTTATTGGAACTAGCGAAAATCCATCG
AAGGAACAAAAATACATAAAAACAATTGGCATCATTTGCAAACTTTCATAAAATTCATGCTTTTAAGAAATCACTGAGATGGTGGTGGATGCACTAAGCA
TATCAGAAACAACGTGCATGGTTGGACGAAATTGTGGATTGGAGTGAATGCATTTAGTCGCAAGTTTAACAATGAACATCAAAATCTCCTCTTCTTTGGG
GTTGGGATACAGAATGCGCGGATCCAAAAAATCCTTAAACTGTAATTCTCCATGTCTGAGACTGTCACCAGGACGATTTCCTTTGATCACTTCCAAAGCC
AACACTCCAAAGCTGTACACATCACACTTTTCTGTCACTTTCATTGTGTAAGCAAGCTCTGCCAAAGCATCAGTGAACAAATACAATTAAAGTCATGTAT
GAACAATCTGTGGATGATATATATGAAAAAAGAAAAAATATTACCCGGTGCAACATAACCATATGTGCCTGCAAGAGCGCTCAAATTTGATGAGTCGCAT
TTCAAAAACTTAGCAGTTCCAAAATCTGAAATATGTGCCTCGTACTCTGTATCAAGCAAAATGTTGTTGCTTGAGATATCTCGATGAACAATTGGAGGAG
AACAACTATGATGCA