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Detailed information on CNT30317870


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639074Corylus avellanaCapsicum annuum16.0322.0781.82143forward
CNT3093222Corylus avellanaSolanum tuberosum10.5427.4184.0494forward
CNT30146611Corylus avellanaMedicago truncatula1225.4283.18107forward

Expression of CNT30317870

Peptides detected in this lncRNA

>peptide 1 (84 aa)
LLSLCITTHPLKQSPPSSFALKLLNCHNRFLNQLQTSALVNPIQVLLALWISFNLFGTLETVVERVELLEWSAIWAALQIQRRI*

Sequence

>CNT30317870
CGCTGCTCAGTCTCTGTATAACTACCCATCCTCTAAAACAATCCCCACCCTCTTCTTTCGCTTTGAAATTGCTCAATTGTCATAATAGATTTCTAAACCA
ATTGCAAACATCTGCTCTTGTTAACCCAATTCAGGTTTTGTTGGCACTTTGGATTTCCTTTAATTTGTTTGGAACTTTGGAGACGGTGGTGGAAAGGGTT
GAATTATTGGAGTGGAGTGCCATATGGGCGGCGTTGCAAATTCAGAGGAGGATATAGAGCAGGAGCACCTGGCATTATCAATGCACACGAGGAAAAAGGG
GGTGTAATGTAGTAGGAATATTCACAGTTGAGGCTGATAACATCTGAGAAATCATCTGCATGGTTGGCCTACACTGTGGATTTTGACATAAGCAAGCAGT
TGCGCAAGTTACAATCTTTTTCAGTTGGTCCTCAACTTCAGCTGTGGGAGGTGAAAGGCGTTGGTCCGATATGTCCTTCAGCTGTATGTTACCGGAGGGA
GACAATATTGCAGTAGAGATGTAATCACCAAGATGGTTTCCTTTGATTACTTCAAGTGCTAAAACTCCGAAGCTATACACGTCACATTTCTCAGTCACCT
TCATTGTGTAAGCAAGCTCTGCCAACAAATTTGGAAGGGGGTTTTTGTTAATTTTTTTATAATATGGTTTGTTAATTAACATAAGTGTAAACAAATTAAA
GTAGTATTACCTGGTGCTACATATCCAAGCGTGCCTGCAAATCCGGTCCAATTGGATGAGTCTACCTGCATAAGTTTAGCGGTGCCAAAGTCTGAAACAT
GCGCTACATAGTCAGAATCCAGCAAAATATTCTTGCTTGATATGTCTCTGTGAACAATGGGCGGTGAGCAATCATGATGCATGTATGACAAG