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Detailed information on CNT30119800


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FNB0|CHLH_ARATH, E-value = 6e-53

BLAST vs NONCODE:
NONPOPT001712, E-value = 8e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3093143Citrus clementinaSolanum tuberosum26.1823.9883.62177forward

Expression of CNT30119800

Peptides detected in this lncRNA

>peptide 1 (58 aa)
NTASSLSLSFSTAALIFNASSSTKIRDPINIFAFSRSLQKVLYVSTSRSSSTKYPTTS*

>peptide 2 (67 aa)
QHCIKPIPFFLHSSLDLQCELLNKNQRPYKYICILKIFTESFVRVNITKLLNQVPNNLVRSIVNLLV*

Sequence

>CNT30119800
CAACACTGCATCAAGCCTATCCCTTTCTTTCTCCACAGCAGCCTTGATCTTCAATGCGAGCTCCTCAACAAAAATCAGAGACCCTATAAATATATTTGCA
TTCTCAAGATCTTTACAGAAAGTTTTGTACGTGTCAACATCACGAAGCTCCTCAACCAAGTACCCAACAACCTCGTAAGAAGCATAGTTAACTTGCTGGT
TTAAAGCCTGAACTGCAGCTGAGAGAGCAGATTGGTATTGAGCTTCAAGAACTACATAAACAATCTTTACCGTGGGAAGATTATCTCTGTTTTCAGGCAC
AATTCGACGAACTTCTGGGGAAGTTTGAGTAAAGAGGCCATTGCTGCTAAAAATTTACAAGAAGTTTCAGCAGAAGTCCTCTGTTTCTCTCTGTCTCTAA
ATTTAGAGAGAAATAAAGAAGGTCGAAAGAAGAAGAGGACACCAAAAAAGATATTGCAGCTTCTGTTTCAGTGCTGCTGCTGCTTATTTTTTTCATTAAC
AGCTTAGTGGCTATGAGTTTTTATATTTTCTGTTGAGGAGAAAGTTTAAGAGAGAGGGATTTTTGAGAATTGAAACAGTTGGTTAATATCGTTAGTGGTG
GGAGGAAGGAACACGTGGCAGAACGGGTAGTCAAGGAGTCATGATGATTGGGGTCATATTTGAGGCTGAGTTTGTT