Detailed information on CNT3088237


BLAST search results

BLAST vs Swiss-Prot:
sp|P49158|ACCD_SOYBN, E-value = 1e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615987Vigna radiataSesamum indicum72.922.8585.5269forward
CNT30632299Vigna radiataVigna unguiculata95.1223.9396.87351forward
CNT30195964Vigna radiataPisum sativum25.230.1989.2593forward
CNT30172172Vigna radiataTrifolium pratense95.1245.1285.75351forward

Expression of CNT3088237

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFFFDKNKYDLYKVLLLNEIQWDPEKPCLHL*

>peptide 2 (30 aa)
MGSRETMSSSIGFQVPESIENSILSELNISN

Sequence

>CNT3088237
CGCATAAACTTCCTTCTTGCATAGGCGCTCCTCTAGACGAACATACGAGAATAAGAGGTAAAAGTTGATTAGTAGCATATTCTACCAAACGGGTGATTTT
CTCACCTACTACGAGTCCCATGCTACCTCCCACAAACTTAAAATCCATAATACCAATTGCTACAGGAATACCATTTACTTGACCTGTCCCTGTTTGAACA
GCCTCAGTTAATCATGTTTTTCTTTGATAAGAATAAATACGATCTCTATAAGGTTCTTCTTCTGAATGAAATTCAATGGGATCCAGAGAAACCATGTCTT
CATCTATAGGATTCCAAGTACCCGAATCAATCGAAAATTCGATTCTATCTGAACTGAACATTTCAAATG