Detailed information on CNT30195964


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615987Pisum sativumSesamum indicum62.3416.3183.85192forward
CNT3088237Pisum sativumVigna radiata30.1925.289.2593forward

Expression of CNT30195964

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MLATVFANIHFGSEKLLKIESIASFALNP

>peptide 2 (94 aa)
TRSFEDSSSESNSMGSGESMSSSRRSFEDSSSEPNSLIESNLMGSTETMSSSIGFQVSRSIERSILSELLIFKCSPQCSQIFILGRKNCLKLSP*

>peptide 3 (67 aa)
HTIFRRFFFRIQFNGIRRKHVFIQAIFRRFLFRTQFFNRIKFNGIHRNHVFIHRIPSISINRKVDSI*

>peptide 4 (37 aa)
PHDLSKILLPNPIQWDPEKACLHPGDLSKIPLPNPIL*

Sequence

>CNT30195964
CCACACGATCTTTCGAAGATTCTTCTTCCGAATCCAATTCAATGGGATCCGGAGAAAGCATGTCTTCATCCAGGCGATCTTTCGAAGATTCCTCTTCCGA
ACCCAATTCTTTAATCGAATCAAATTTAATGGGATCCACAGAAACCATGTCTTCATCCATAGGATTCCAAGTATCTCGATCAATCGAAAGGTCGATTCTA
TCTGAACTGCTCATTTTCAAATGCTCGCCACAGTGTTCGCAAATATTCATTTTGGGTCGGAAAAATTGCTTAAAATTGAGTCCATAGCAAGTTTCGCATT
GAACCCAT