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Detailed information on CNT30172172


BLAST search results

BLAST vs Swiss-Prot:
sp|B1A944|ACCD_CARPA, E-value = 4e-152

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615987Trifolium pratenseSesamum indicum47.9431.6986.06373forward
CNT30632299Trifolium pratenseVigna unguiculata94.650.1786.68736forward
CNT30198060Trifolium pratensePisum sativum35.2210091.61274forward
CNT3088237Trifolium pratenseVigna radiata45.1295.1285.75351forward
CNT30539441Trifolium pratenseBrassica napus81.6212.9982.99635forward
CNT3058960Trifolium pratenseAmborella trichopoda29.9511.4484.55233forward

Expression of CNT30172172

Peptides detected in this lncRNA

>peptide 1 (70 aa)
LRGTIESNKPFSNKNSADCEPSGTSRFNVCSITLLPANAMVASGSTIQISPNIPKLAVTPPVVGDVSIGT*

>peptide 2 (56 aa)
DYAAPLNQINPFRIKIQPIVNLQALPDSTFVQLLFYLQMQWLRLVRQYRYPPTSQN*

>peptide 3 (31 aa)
MGSRETMYSSIGFQVPGSIKSSILSELFIFK*

Sequence

>CNT30172172
GATTACGCGGCACCATTGAATCAAATAAACCCTTTTCGAATAAAAATTCAGCCGATTGTGAACCTTCAGGCACTTCCAGATTCAACGTTTGTTCAATTAC
TCTTTTACCTGCAAATGCAATGGTTGCGTCTGGTTCGACAATACAGATATCCCCCAACATCCCAAAACTAGCTGTTACTCCACCAGTTGTAGGAGATGTA
AGTATCGGTACATAGAATAACTTTTGATTGGTTTGATACTCATGTAAAGCAGAAGAAATTTTAGCCATTTGCATTAAGCTCAAACTTCCTTCTTGCATAC
GCGCTCCTCCAGACGCACATACTATAATAAGAGGTAAGCGTTGATTGGTAGCATATTCAATCAAACGAGTAATTTTCTCACCCACTACGGATCCCATACT
ACCCCCCATAAACTCAAACTCCATAATACCAATTGCTACCGGAATACCATGTAGTTGACCTGTGCCTGTTTGAATCGCCTCCAGTAATCCTGTTTTTTGT
TGATAAGGATCAAGACGATAAGGGTCCTCTTCTGAATGAAATTCAATGGGATCCAGAGAGACCATGTATTCATCCATAGGATTCCAAGTACCCGGATCGA
TCAAAAGTTCGATTCTATCTGAACTGTTCATTTTCAAATGATATCCACAGTGTTCGCAAATATTCAATTTTTCTTTCAAAAATCTCTTGTAATTTAATCC
ATAACAATCTTCGCACTGAACCCACAAATGGCTATAATCTTTATTCACATTGAGTTCGTTAGCTCTTGCTAAATCAAT