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Detailed information on CNT3087008


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630601Vigna radiataVigna unguiculata52.1146.5793.09333forward
CNT30385905Vigna radiataTriticum turgidum28.6433.782.51183forward
CNT30588719Vigna radiataMusa acuminata30.3645.5487.63194forward
CNT30148504Vigna radiataBrachypodium distachyon15.8139.386.14101forward

Expression of CNT3087008

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSLTAKRPSGGYSEKVSTTMGFVGIIFTKPASPFF

Sequence

>CNT3087008
AAGTGGTATAAAATGCTTTTAATAAGAGAGAAAAAGTGAAAAGAATGTAAGATAAAATGTCAGAAGGTTGGAATTTTTTGAGGTGCGATGTAGGATGAAA
CGCTCGTCTAAAAATAGGAACAAAATATAAGCTGACATTCGAAACCCAAACTTGTAATATAGGGCTAGTCCTAAATCTCATTGTATCTTAAAAAACTATA
AACGTTCTGACAAAAACACATTACAACATAAATAACGCATAGAAAAAGAAAAAGTCTAAACCCTGCCGCCATCGATCAAGAACCCAGTTCTGAGAACAAA
ATTTGAGAGATGAGGGAGAAAACCTCAAACGAAATCCGAAAAACAATATCCCGACACGAAAAATAGCAGCGTCAACAACAAGACACCATTTAACACGGGC
ATAATAACAGATATTTCTTGATAGACCATCCTGCGCAATTTACTTCTTCTTCTGCGCAGCCTTGGTAACCTTAGCTCCAGTAGGGTCCTTCTTCTCCACG
CTCTTGATGACACCAACAGCCACAGTCTGACGCATGTCTCTCACAGCAAAACGACCAAGTGGAGGATATTCAGAGAAGGTTTCAACCACCATGGGCTTTG
TGGGAATCATCTTCACAAAACCAGCATCTCCGTTCTTCA