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Detailed information on CNT30725299


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 2e-148

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30609649Lupinus angustifoliusGossypium raimondii57.6977.2883.76585forward
CNT30359492Lupinus angustifoliusLactuca sativa54.1464.2184.34549forward

Expression of CNT30725299

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MDQAWVSQVVKPALTEDLGSSLEPHSLTEFNTVTSQELWEDNSQSSKHSPP*

>peptide 2 (36 aa)
MGPILNTVWAVPWASRGNFLGDSFPHGDPSNSELWS*

>peptide 3 (59 aa)
MFYFFRCSVSGDKVGGKCPSIVVDWVCNMVGKVLQWTLTSDNSLNKETEHGEHGQPSIL*

>peptide 4 (32 aa)
MANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

>peptide 5 (36 aa)
MEILPTPSSGADGESFTAWPAKDGEERAMVEAAIFE*

>peptide 6 (35 aa)
MGRASPPGRPRMGKKGPWLRLPFLNDGDELVFMFM*

Sequence

>CNT30725299
TTCAAATATCAAATTGAAGAGAGAACAACGGCCAACCAGATTAGAAATTAAGTTGCATTAATTTAGATCAAATAGATAAACACAATAATTCACATTAACT
GAAGAAGTACAATTTTAATGTTTTATTTTTTTCGGTGCTCAGTTTCCGGGGACAAAGTTGGTGGCAAATGCCCAAGCATTGTTGTTGACTGGGTCTGCAA
TATGGTCGGCAAGGTTCTCCAATGGACCCTTACCAGTGACAATAGCCTGAACAAAGAAACCGAACACGGAGAACATGGCCAACCTTCCATTCTTTAGCTC
CTTCACCTTCAACTCAGCAAAGGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCACCGGGGTAGAGTGGGTCAGTGACCTCTCCAAGAGGA
CCACCTGCAATTCTGTAACCCTCAACTGCACCCATCAAGATAACTTGTGTAGCCCATATGGCAAGGATACTCTGAGCATGGATCAAGCTTGGGTTTCCCA
AGTAGTCAAGCCCGCCCTCACTGAAGATCTGGGATCCAGCCTTGAACCACACAGCCTCACCGAATTTAACACCGTTACGAGCCAAGAGCTCTGGGAAGAC
AATTCCCAAAGCTCCAAGCATAGCCCACCGTGAGTGGATCACCTCCAACTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCTGAAAGCCCAGCAGTGTCC
CAACCATAGTCACCAGGGAACTCACCAGTCAAGTAGCTTGGGGCCTCACCAGAGAATGGGCCCAATACTTAACACGGTCTGGGCCGTACCATGGGCTTCC
AGAGGAAACTTTCTTGGTGACAGTTTTCCTCATGGAGATCCTTCCAACTCCGAGCTCTGGAGCTGATGGGGAGAGCTTCACCGCCTGGCCGGCCAAGGAT
GGGGAAGAAAGGGCCATGGTTGAGGCTGCCATTTTTGAATGATGGTGATGAGCTTGTGTTTATGTTTATGTAGGGAGTAGTGATTGGAAAAGATGAGAGA
TTTGAGGAAACATG