Detailed information on CNT3071378


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517802Quercus suberJuglans regia53.5856.583.42187forward
CNT30632133Quercus suberVigna unguiculata22.9211.5988.7580forward
CNT3043231Quercus suberPrunus dulcis42.6917.4781.21149forward

Expression of CNT3071378

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRIAPTKKMAWDTTMVYLRPIQSEVLPAANEPMSE*

>peptide 2 (30 aa)
HENSPNKEDGLGHHYGVSPAYPVGGSAGGE*

Sequence

>CNT3071378
CATGAGAATAGCCCCAACAAAGAAGATGGCTTGGGACACCACTATGGTGTATCTCCGGCCTATCCAGTCGGAGGTTCTGCCGGCGGCGAATGAGCCTATG
AGTGAGTAAAGGTTGAGGATTCCGGCGAGGATTTCAATCTGCACGTCTGAGATTTTGAGGTCGTCTTGGATGTAAATCATAGCTCCACTCATTACACCAA
TATCTGAAAGCAACAAACAAACACATACATATGAACAAAATGTAAAGATCCAGTGAATTTGTATTGGTATGATTGCAATATCGCAATTATATATTCAAAA
ACAACATTTTCCGGAGAAAATAAGGTATGTTTTGTCAAGAAACATAATT