Detailed information on CNT30517802


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071378Juglans regiaQuercus suber56.553.5883.42187forward
CNT30526724Juglans regiaPhaseolus vulgaris35.9514.7184.87119forward
CNT3043231Juglans regiaPrunus dulcis47.1318.2982.69156forward
CNT30559342Juglans regiaActinidia chinensis32.0214.2583.02106forward

Expression of CNT30517802

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MPERPPRCRLGRSANHEKGVVSGQAHEDSSDEKDDLGYHDGVAAAYPVGGSASGAGTDEAVEVKYPGEDFDLQVRNLEIFLDVNYCSTHYSNI*

>peptide 2 (30 aa)
LREGGEETTSGCRRDLRGVDWGDRPTMRKA*

Sequence

>CNT30517802
CTCAGGGAAGGAGGTGAGGAAACCACGAGTGGATGCCGGAGAGACCTCCGCGGTGTAGACTGGGGCGATCGGCCAACCATGAGAAAGGCGTAGTTAGTGG
CCAAGCCCATGAAGATAGCTCCGATGAAAAAGATGACTTGGGCTACCACGATGGTGTAGCGGCGGCCTATCCAGTCGGAGGTTCTGCCAGCGGCGCAGGA
ACCGATGAGGCAGTAGAGGTTAAGTATCCCGGCGAGGACTTCGACCTGCAAGTCCGAAATCTTGAGATCTTTTTGGATGTAAATTATTGCTCCACTCATT
ACTCCAATATCTGAAACAACATAAGCGGACG