Detailed information on CNT30712174


BLAST search results

BLAST vs Swiss-Prot:
sp|P26969|GCSP_PEA, E-value = 6e-41

BLAST vs NONCODE:
NONATHT003128, E-value = 1e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30565584Glycine maxActinidia chinensis60.0821.585.23149forward
CNT30570509Glycine maxVitis vinifera59.6823.1285.14148forward

Expression of CNT30712174

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSLLHKLSIVQNLSLSARVLHKHTTNIPRLVINV

>peptide 2 (41 aa)
GSLVPPDMLLPSLHCHPQSGLSGRIDTDPDDSPRHHPLVLL*

>peptide 3 (48 aa)
VALSLLICCSLVCIAILKAVFPEESTLTPMILPGIILLYSCEVAKKAA*

Sequence

>CNT30712174
GGTAGCCTTGTCCCTCCTGATATGCTGCTCCCTAGTTTGCATTGCCATCCTCAAAGCGGTCTTTCCGGAAGAATCGACACTGACCCCGATGATTCTCCCA
GGCATCATCCTCTTGTACTCTTGTGAAGTGGCCAAGAAAGCTGCATGAGCCTTCTTCACAAACTCTCCATAGTCCAAAACCTCTCCCTCAGTGCCAGGGT
ACTGCACAAGCACACCACAAACATCCCCAGACTTGTAATCAATGTCCT