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Detailed information on CNT30565584


BLAST search results

BLAST vs Swiss-Prot:
sp|O49850|GCSP_FLAAN, E-value = 5e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547418Actinidia chinensisIpomoea triloba8.3726.3694.8358forward
CNT30712174Actinidia chinensisGlycine max21.560.0885.23149forward
CNT30661341Actinidia chinensisTriticum dicoccoides10.6829.687.8474forward
CNT30411467Actinidia chinensisPapaver somniferum26.2628.0481.32182forward

Expression of CNT30565584

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLSYGGGRKYHSVSELRSILIETETQYQNPHWMTNS

>peptide 2 (48 aa)
VALSLRICCSLVCIAIRRAGFPEESMLTPIILPGIILLYSWEVAKKAA*

>peptide 3 (84 aa)
GSFVPPNMLLPCLHCHTQSRFSRRIDAHTDNSTWHHPLVLLGSGQESSMRTSIPHRNPKPLSRANNNIHTEFTRRPVRSEIIVW*

>peptide 4 (74 aa)
MCSIIWLSVSPSSNLENFIFSRRIDLGTVASISESRLVCPQSSAIFVCSSGDAELWRRAKVSLGFRASIDTDRN*

Sequence

>CNT30565584
GGTAGCTTTGTCCCTCCGAATATGTTGCTCCCTTGTCTGCATTGCCATACGCAGAGCAGGTTTTCCAGAAGAATCGATGCTCACACCGATAATTCTACCT
GGCATCATCCTCTTGTACTCTTGGGAAGTGGCCAAGAAAGCAGCATGAGGACCTCCATACCCCATCGGAACCCCAAACCTCTGAGCCGAGCCAACAACAA
TATCCACACCGAATTCACCAGGAGGCCAGTAAGATCCGAAATCATAGTCTGGTAATTAAGCAGGGACTCAAGACGACCCTGCGCAATCTCAGCCTGGTAT
GGCGTGTACTGGGTGTACCAACCCGGATTCTCCATAATGTTCCTCAAAATCACAGGTGGAACAGAGGTGTTATAGTAACCCATCCCAATAAAAGACTTAT
AAACCTTATTCATAGAAGCCAGTTTCTTCATGTGCTCAATCATTTGGCTCTCAGTTAGCCCCTCATCAAACTTAGAAAACTTCATTTTCTCAAGACGAAT
CGATTTAGGCACTGTCGCGTCTATAAGCGAATCGAGACTAGTGTGCCCACAAAGTTCAGCCATTTTTGTTTGTTCTTCAGGGGATGCTGAGTTATGGCGG
CGGGCGAAAGTATCACTCGGTTTCAGAGCTTCGATCGATACTGATCGAAACTGAGACCCAATACCAAAACCCACATTGGATGACAAATTCCTC