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Detailed information on CNT30711311


BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 5e-102

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30611432Glycine maxArabis alpina56.659.5379.18562forward
CNT30607765Glycine maxGossypium raimondii31.9247.3883.28317forward

Expression of CNT30711311

Peptides detected in this lncRNA

>peptide 1 (52 aa)
KEQREDIERWLSFGNCEANKNQDQEGKEYDIIHLVELETGQDVVVHGVSQMI*

>peptide 2 (31 aa)
MGVLSPEGSDQPCLEFQVLLHQLHPTLHNDH*

Sequence

>CNT30711311
AAAGAGCAAAGAGAGGATATAGAAAGGTGGTTGAGCTTTGGTAACTGCGAAGCGAACAAGAACCAAGACCAAGAGGGTAAAGAATATGATATAATACATT
TAGTGGAACTTGAGACTGGTCAAGATGTTGTTGTGCACGGGGTCAGCCAAATGATCTAGGAGGTTTTGGTATGGGCCAACACCTGTGACAAGAGCTTGAA
CAAAGTAACCCAAGATTGCCAACATAGCCAACCTTCCATTCTTCACTTCCTTGAGCTTCAAATCCTTCAAGGACTTCTCATCCTTACCAAAGCCAAGTGG
GTTGAAGAAAGGTCCTCCTGGGAAGTATTGTTTGCCCATAGAGCCTGGTTTGGCCCAGTCTTGGAATCTTCTGTGCTCTGCAAATCCCATCAGTGCCATC
TCAAACACGAACAGTGTGTAGGAGTCTGCCCAGTAGTTGTAGGTTCCTGCAGGTGGGAACACACCGGTTCTGAACCATGGGAGTGCTGTCTCCTGAGGGA
TCAGACCAGCCTTGCCTAGAATTTCAGGTGCTATTGCACCAACTGCACCCAACATTGCATAACGACCATTGATTATCTCACCATATGCTAGCCATTTCGG
CTCAATGAACCCTCCTGTTCCTTCAGGGTCCGAAAGTCCCAGAGGGTCAAATCCATAGTCACCCGGAAGGCTGCAATGCACATGATGCCAGATAAAGTCA
ATTTCAGCACCAGCATAGTAACTAATTATTTACTTCTCTTCTAAATTGCATAGATACACTAGTGTTATTCGAACAAGGTTCCCAGGAACGGAATAAAATG
AATTAAGTTTCTTTCATAAGTTTATTGGAGAAATTAAGCGAAAGAGCTACTATAAATTAACTTAATTATGTTTTAACTCATGAAATAAACTTCATTTTAC
CTTTTTATTCTTCAAGTGCTCATGAGAAGTTTATATATCCAGACATGATCATATCGTTATGTTAAGCTATTGATGAACTAGGATGAAATTTAC