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Detailed information on CNT30709894


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 7e-109

BLAST vs NONCODE:
NONBNAT007398, E-value = 2e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728214Glycine maxCorchorus capsularis79.556.1885.84473forward
CNT30609983Glycine maxGossypium raimondii79.3358.6384.11472forward

Expression of CNT30709894

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30709894
GTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAATTCACATTATCTGAAGTACTTCACCAAACACAAATCTAAAAACTCTCAAAAGTCA
TTTCGTTCTTTGACGCTCACTTTCCGGGGACGAAGTTGGTGGCATAGGCCCAGGCGTTGTTGTTGACAGGCTCAGCAAAAGCCTCTGGGTCATCAGCAAG
GCCCAATGGGTCGAAGCTGCCACCTGGGTAGATTGGGTCAGTGACCTCACCGAGGGGGCCACCAGCAATACGGTAACCTTCAACGGCACCCATTAGGATA
ACTTGTGTGGCCCAGATGGCGAGGATGCTCTGGGCGTGGATCAGGCTTGGGTTGCCCAAGTAGTCGAGCCCACCCTCGCTGAAGATCTGGGACCCGGCCT
TGAACCACACGGCTTCTCCGAACTTCACCCCGTTGCGGGACAGCAACTCCGGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATCAC
TTCGAGTTCACGGTTCTTGGCGAAGGTTTCTGGGTCTGCGGAAAGCCCAGCAGTGTCCCAGCCGTAGTCGCCTGGGAACTCACCGGTTAGGTAGG