Detailed information on CNT30708629


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 5e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3096857Glycine maxSolanum tuberosum16.7124.7385.5169forward
CNT30724837Glycine maxLupinus angustifolius36.0817.881.21149forward
CNT3050792Glycine maxCucumis sativus47.719.7482.74197forward

Expression of CNT30708629

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MPRSKVMLPPTKRAKAWAMEAEMRPAGVAAPLSVSLL*

Sequence

>CNT30708629
GGAGGCAGTGACGAAGGCGAGGAGGAGGGAGGCCACGATGGAGCCGAGGAGCTGGGCGATGACGTAGACGATGCCGCGGAGTAAGGTGATGTTGCCGCCC
ACGAAGAGGGCGAAAGCATGGGCGATGGAAGCGGAGATGAGGCCGGCGGGAGTGGCGGCGCCGTTGTCGGTGAGCTTGTTGTAGGCGATGCCGGAACCTG
AACCGGCGAACACGAAGATCAAGGTGGAGATGAACTCAGCCAACCCCGCCTTCAACGTGTCGGGGTGAGTAGCCTCTTCAGGCCTTCCGATGGCGATGTT
TCTGATCGGCATCTTCTTCAATCAACGGTGATGATGATGATGATGATGACGACTTATGAAGGATCAAGTGAACACCGATCACTCACTGAAACCACTCTCT
GTTTCGCTATGCT