Detailed information on CNT3096857


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382128Solanum tuberosumManihot esculenta35.1325.1383.6798forward
CNT30628528Solanum tuberosumVigna unguiculata24.377.6788.2468forward
CNT30708629Solanum tuberosumGlycine max24.7316.7185.5169forward
CNT3084586Solanum tuberosumVigna radiata24.734.8586.9669forward
CNT30420453Solanum tuberosumPapaver somniferum36.211.3188.12101forward
CNT30176366Solanum tuberosumVigna angularis24.7314.4186.9669forward
CNT30113801Solanum tuberosumFicus carica20.7914.0487.9358forward
CNT3050751Solanum tuberosumCucumis sativus36.210.2682.18101forward

Expression of CNT3096857

Peptides detected in this lncRNA

>peptide 1 (59 aa)
KSVILPPTKAPNVTAGLTCPPEMLAPTETATNSPKAWAIAAAMRPVEINSANAAFKASG*

Sequence

>CNT3096857
GTAAAAGTGTTATATTACCACCAACAAAAGCACCAAATGTAACAGCAGGGTTAACATGTCCTCCAGAAATGTTAGCCCCAACCGAAACCGCTACGAATAG
CCCAAAAGCATGGGCAATCGCAGCAGCAATGAGACCGGTGGAGATAAACTCAGCCAACGCCGCCTTTAAGGCGTCGGGGTGAGTGGCTTCCTCCGTCCTT
CCGATTGCTATCCGGCTGATCGGCATATCGTCGGAAAATCAAGAATGTTAAATATTTGATAAAAAAGTTTTGTTTTTTT