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Detailed information on CNT30707193


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042874Prunus aviumPrunus dulcis71.9962.1789.62424forward
CNT30573009Prunus aviumVitis vinifera12.2227.6984.7272forward

Expression of CNT30707193

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MYLDRNLTRKLKFGYFKLRTCPLSHYIPVSRQAPPFVETWPHRSIQ*

Sequence

>CNT30707193
ACCCTTGACCTGCTTTAATTTATTCTTCACCTATATTTCATTTCATTATTAGTTGGGGTGACAATAATAACTACTTAATATATCATCGTTAGGTAAGATT
CCATATCACTCTTGTTAAATCACGAATCAATAAGGACACAAACGTCATTTCACAACCAAACAGATACAACTCCTTCATATCATATATGTATCTAGACAGA
AATCTGACTAGAAAATTGAAATTTGGTTATTTTAAATTACGAACGTGCCCCTTGTCTCACTACATTCCAGTATCAAGGCAGGCTCCACCATTTGTGGAGA
CTTGGCCCCACCGTAGTATACAGTGAGCCAGGGGTACATCTGACTTTCCGGATGCTTACCAGAAAACGGAGATACCGGAGGCGTAGACCCAGCTGGCGAA
ATCGGAGCTGGATCGGAAACTGAAGGTTTTGTGCTTGCGGAGCTTGCCAAGACCGATATCGGGCCGGGGCCCGGCGACGGTGTCGTCCCAGAGCTGGTCA
AGTAGGCCCATGTTATATATCGTGCGCTGGCTGGCAGACACTGGATCAGCAGCGTATGATAGCAGAACTGGCGTAACTTAACGATTGCA