Detailed information on CNT30705581


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT78|RD21C_ARATH, E-value = 4e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046702Prunus aviumPrunus dulcis82.8990.6495.48310forward
CNT30163286Prunus aviumPistacia vera87.9783.0882.37329forward

Expression of CNT30705581

Peptides detected in this lncRNA

>peptide 1 (50 aa)
IIWATVFSSGAANRILIFTATIDEAVVKEFKEATTCLITWTIGEVSAVTW*

>peptide 2 (32 aa)
MSHHLDNRRSLRSHLVKEREVALLGMVQMTLW*

Sequence

>CNT30705581
TAATCATTTGGGCAACAGTATTCAGTTCCGGTGCAGCAAACCGCATTCTGATATTCACAGCAACCATAGATGAGGCAGTAGTCAAGGAATTCAAAGAGGC
AACAACATGTCTCATCACTTGGACAATAGGAGAAGTCTCCGCAGTCACTTGGTGAAGGAGAGGGAGGTGGCGCTGTTGGGGATGGTGCAGATGACTCTTT
GGTAGGATATGAAGCCATGGCATTGATTGCACAAACCCCATATTTTAAATTAGTGTTCCTTCTTATGTAAATGTATCCATCTATCCCCCAACTAGTCCCC
CATGAATTCTTTACAATCCAGTAATCTTCATCGCCTTCGGAACCGTATCCTACAACCAGAGGTGCATGGTCAAT