Detailed information on CNT3046702


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30562261Prunus dulcisActinidia chinensis35.674082.79122forward
CNT30705581Prunus dulcisPrunus avium90.6482.8995.48310forward

Expression of CNT3046702

Peptides detected in this lncRNA

>peptide 1 (61 aa)
AETIFNITNGIITWATVVSSGAANRILIFTATIDEAVVQEFKEATACLITWTIGEVSAVTW*

>peptide 2 (34 aa)
GRDHLQHHKWDNHLGNSSQFRCSKPHSDIHSNHR*

>peptide 3 (34 aa)
MSHHLDNRRSLRSHLVKEREVVVELLGMVQMTPW*

Sequence

>CNT3046702
GGCAGAGACCATCTTCAACATCACAAATGGGATAATCACTTGGGCAACAGTAGTCAGTTCCGGTGCAGCAAACCGCATTCTGATATTCACAGCAACCATA
GATGAGGCAGTAGTCCAAGAATTCAAAGAGGCAACAGCATGTCTCATCACTTGGACAATAGGAGAAGTCTCCGCAGTCACTTGGTGAAGGAGAGGGAGGT
GGTGGTGGAGCTGTTGGGGATGGTGCAGATGACTCCTTGGTAGGATATGAAGCCATGGCATTGATTGCACAAACCCCATATTTTAAATTAGTGTTCCTTC
TTATGTAAATGTATCCATCCATCCCCCAACTAGTCCCCCATG