Detailed information on CNT30163286


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT78|RD21C_ARATH, E-value = 3e-37

BLAST vs NONCODE:
NONTCAT002529, E-value = 1e-52

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30571877Pistacia veraVitis vinifera87.6387.8580.12347forward
CNT30705581Pistacia veraPrunus avium83.0887.9782.37329forward

Expression of CNT30163286

Peptides detected in this lncRNA

>peptide 1 (74 aa)
WGSSTQFQYSTQHFHMNNSHRSGSNQRIHIGNNMSHHLGNMRSPHIHLVKAREVAVVKRELVQMILWSDKRPLH*

Sequence

>CNT30163286
TGGGGCAGCAGTACTCAGTTCCAGTACAGCACACAGCATTTTCATATGAACAACAGCCATAGATCAGGCAGTAATCAAAGAATTCATATAGGCAACAACA
TGTCTCATCACTTGGGCAATATGAGAAGTCCCCACATTCACTTGGTGAAGGCGAGGGAGGTGGCGGTGGTGAAGAGGGAGCTGGTGCAGATGATTCTTTG
GTCGGATAAGAGGCCATTGCATTGACCGCACATTCACCATATTCTAAGTCTGTGTTCCTTTTAAGGTAGAAATATCCGTCCATTCCCCAACTTGTTCCCC
AAGAATTCTTTACAATCCAATAATCTTCATCATCTTCAGAACCATAACCAACAATCAAAACTGCATGATCAATCTCATCTGGATCGTCTGAGCAGT