Detailed information on CNT30697668


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8GSM3|LOX22_HORVU, E-value = 4e-96

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT308024Oryza sativaZea mays11.5935.3986.0586forward
CNT30104367Oryza sativaOryza rufipogon14.2921.9988.68106forward

Expression of CNT30697668

Peptides detected in this lncRNA

>peptide 1 (58 aa)
KWRCCWGCPSPSPTTCPWGHHSTALAAHMAPHQGPTGSSAPDPCSGGRSSPRSSSSSR*

>peptide 2 (47 aa)
MSVACPRTRAPPPSACFAARWWDGWGSSRRRGTGRSSPLRGAPMRPK*

>peptide 3 (40 aa)
MVVRTLMRLPWQSSSGHPSFLSGWPFVCTSFHQPWSSSSE*

>peptide 4 (35 aa)
MAVQLWPSVLLVRVAIRLHLVPPTMELLIRVNVRR*

>peptide 5 (65 aa)
MYSSLGECDDNRLSAGKMRVVWYCDGNVSSKTLTGSSTNVGCMPSHPCSSSVGMFRRAMVGRLGK*

Sequence

>CNT30697668
TCAAATGGAGATGCTGTTGGGGATGCCCATCTCCATCACCGACGACATGTCCTTGGGGTCACCATAGCACGGCTTTAGCAGCACATATGGCACCACACCA
GGGCCCCACCGGTTCCTCCGCTCCGGATCCCTGTTCCGGCGGTCGATCGTCTCCGCGATCCTCATCATCCTCTCGTTGAACCTCCCGAACGCCGCCCTCA
CCTCCCTGTTTGCCATCCACGCCGCCTCCGTGTGCGTGCCCATGTACTCCTCGCTTGGCGAGTGCGACGACAACAGGTTGAGCGCTGGCAAGATGAGGGT
AGTCTGGTACTGCGACGGGAACGTGTCCAGCAAAACCCTGACAGGATCCTCAACGAATGTCGGTTGCATGCCCTCGCACCCGTGCTCCTCCTCCGTCGGC
ATGTTTCGCCGCGCGATGGTGGGACGGTTGGGGAAGTAGCCGGCGTAGGGGTACTGGCCGAAGTTCACCGCTGCGTGGTGCCCCGATGCGACCCAAATAA
TGGTGGTCAGGACCTTGATGAGGCTCCCATGGCAGTCCAGCTCTGGCCATCCGTCCTTCTTGTCCGGGTGGCCATTCGTTTGCACCTCGTTCCACCAACC
ATGGAGCTCCTCATCAGAGTAAATGTCCGACGCTGACGGGTAGTAATGGTTCACATGGTCTGACACCCACTCCTTGATAGAGTCCCAGACGAGCAGGCCG
TCGTTGGCATACGGGTAGTCCTCTATCGTTAGCTTCAGCTTG