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Detailed information on CNT30104367


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697668Oryza rufipogonOryza sativa21.9914.2988.68106forward

Expression of CNT30104367

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MQGVIYKKTVANRCQVILFHNRTMSTPNRCRLAVLAIP*

>peptide 2 (34 aa)
KRMNEKMPHLHILSLLYCKHHATPLCYIRSIGVV*

>peptide 3 (34 aa)
MSTPNRCKLIGTTQIEMLLGIPISITDVMSLGSP*

Sequence

>CNT30104367
AAGAGAATGAATGAAAAGATGCCACACCTTCATATCTTGTCTCTACTTTATTGTAAACATCATGCAACCCCTCTGTGCTACATACGTAGCATAGGGGTTG
TATAATAGGAATGACCTTTCTGTAGTACTAGCACGCTACACTGTGATCGATAGCCATCTATACCGACAAGGAAATAATGCAGGGCGTTATTTACAAGAAA
ACAGTGGCAAACAGATGCCAGGTCATTTTATTTCATAATCGCACGATGAGCACTCCAAACAGATGCAGGCTCGCTGTGTTAGCCATTCCTTGACGAGGCC
GGATTTTTAATCCATTTTATTTCATACATAATGTCACGATGAGCACGCCAAACAGATGCAAGCTCATTGGCACAACTCAAATTGAGATGCTGTTGGGGAT
ACCCATCTCCATCACGGACGTCATGTCCTTAGGGTCACCGTAGGACGGCTTGAGCAGCACGTACGGCACCACGCCGGGGCCC