Detailed information on CNT30697378


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000401, E-value = 7e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553906Oryza sativaOryza glaberrima43.249.0282.68179reverse complement
CNT30370123Oryza sativaOryza glumipatula40.346.6985.03167reverse complement
CNT30576500Oryza sativaOryza barthii43.246.3683.8179reverse complement

Expression of CNT30697378

Peptides detected in this lncRNA

>peptide 1 (38 aa)
EGRRRGGERRGRGEDEDKEGEEKEIRMGYACACAWAGA*

Sequence

>CNT30697378
GGGAGGGGAGGAGGAGAGGGGGTGAGAGAAGAGGAAGGGGAGAGGATGAAGATAAGGAAGGAGAAGAAAAAGAGATAAGGATGGGCTACGCATGCGCTTG
TGCGTGGGCTGGTGCATGATCTTTACTCCCGGTTGATAATATCAACCGGGACTAAAGATCCTATCTTTAGTCCCGGTTGGTGTTATCAACCGGGACTAAA
GATATCGGGGGGCCTGACAAGGCCTGACAGATTTAGAACCGGGACTAAAGATCATTTTTAGTCCCGGTTGGTAACACCAACCGAGACTAAAGATCAAATA
TGCCCGCTGTAGCCACCAACCGGGACTAAAGATCATCTTTAGTCCCGGTTTTTAGTGGAACCGAGACTATTGTGGATTTCGGGCGACCGACCAAAGATGG
TTTCTCCACCAGTG