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Detailed information on CNT30694788


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596666Oryza sativaOryza meridionalis100.4868.7796.68632forward
CNT30370753Oryza sativaOryza glumipatula100.4871.6697.15632forward
CNT30117130Oryza sativaOryza nivara98.7370.9795.17621forward

Expression of CNT30694788

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MASAKWKHSERIDLISLSLQTLLLTLDSTQAVVAR

>peptide 2 (34 aa)
MQWQAPNGSTVRGLISSRCHYKLYYSLLTVHKLW*

Sequence

>CNT30694788
GGCACAATTATAGCTATTGCTGGTGAAAGAGGTGGTGGCTTTGGCAGAGATGGCTCTGGCTGAGGCTTGGGTTCTGGCTTAGGATCAGGCTGTGGCTCCG
GCTTAGGATTAGGATTTGGCTTGGGGTTAGGACTTGGCTCAGGTTTGGGTTCAGGCTTTGGCTCCGGCTTAGGATTTGGGCTCGGCTCCGGTTGTGGCTT
AGGCTTTGGATTTGGTTTTGGGTCAGCTTTGGGGCTAGGTTGCGGGTTCGGTTGAGGATCTTGTTTCGGGTCAGGTTGTGGGTTCGGTTGAGGATCTTGT
TTTGGGTCAGGCTGTGGTGTAGGTTTTGGGTCAGGCTGCGGTGATGGTTTTGGATCTGGCTGTGGGTTAGGTTGAGGGTTAGGCTGTGGACTGGGCTTTG
TCTCTGGTTGTGGTTTTGGTGTTGGGTCAGGTTTAGGATTGGGATCTGCTGGCTTTGGATCAGATTTAGCTTCAATCACGCGTCCATTGGCAATGTGATC
AGGAACATTTGCCGCCAATGCAATGGCAAGCGCCAAATGGAAGCACAGTGAGAGGATTGATCTCATCTCGTTGTCACTACAAACTCTACTACTCACTCTT
GACAGTACACAAGCTGTGGTAGCTAGGTG