Detailed information on CNT30690852


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 2e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676135Oryza sativaSetaria viridis46.2829.7991.96112forward
CNT30187285Oryza sativaSecale cereale42.1527.5787.25102forward

Expression of CNT30690852

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MRLRSMGRLRLIPRMLPLMAVQRHTAASRFTARNRANALDAIATYPRSIDHKRS*

>peptide 2 (67 aa)
GDGLAAVVEDEAEVDGEVEVDSEDVAPDGRAEAHRRLEVHGQEQSERLGRHCYVPEIDRSQAQLITS*

Sequence

>CNT30690852
GGGGACGGTCTTGCCGCAGTAGTTGAGGATGAGGCTGAGGTCGATGGGGAGGTTGAGGTTGATTCCGAGGATGTTGCCCCTGATGGCCGTGCAGAGGCAC
ACCGCCGCCTCGAGGTTCACGGCCAGGAACAGAGCGAACGCCTTGGACGCCATTGCTACGTACCCGAGATCGATCGATCACAAGCGCAGCTAATCACTAG
CTAGCTAATTAAGAGCTCTTGATCAGCTGGAGATGATTAGGC